RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 WDR24Q96S15 920 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 SF3B5Q9BWJ5 86 aaKnown RBP3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 TTLL2Q9BWV7 592 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 ASNSD1Q9NWL6 643 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 OGDHLQ9ULD0 1010 aa3.99□□□□□ -1.77
SMCHD1-206ENST00000581631 A0A1B0GUV1 79 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 SNX2O60749 519 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 MAP4K4O95819 1239 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 ZBED1O96006 694 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 MYF5P13349 255 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 VPS41P49754 854 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 FMO1Q01740 532 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 DMWDQ09019 674 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 GALEQ14376 348 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 GBX1Q14549 363 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 POLD3Q15054 466 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 KRTAP24-1Q3LI83 254 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 DARS2Q6PI48 645 aaKnown RBP3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 SLC39A5Q6ZMH5 540 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 CHST15Q7LFX5 561 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 SRGAP1Q7Z6B7 1085 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 FMNL3Q8IVF7 1028 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 YAF2Q8IY57 180 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 LPAR1Q92633 364 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 AKAP1Q92667 903 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 URB1-AS1Q96HZ7 61 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 LRRC27Q9C0I9 530 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 ZCWPW1Q9H0M4 648 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 OBP2AQ9NY56 170 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 ERRFI1Q9UJM3 462 aaPredicted RBP3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 HPSEQ9Y251 543 aa3.98□□□□□ -1.77
SMCHD1-206ENST00000581631 WDR81Q562E7 1941 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 GOLIM4O00461 696 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 MGEA5O60502 916 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 SGPL1O95470 568 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 PEX2P28328 305 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 PBX1P40424 430 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 ENTPD1P49961 510 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 DGKQP52824 942 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 C6orf10Q5SRN2 563 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 FAM90A2PQ658T7 463 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 ZNF474Q6S9Z5 364 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 SESTD1Q86VW0 696 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 RHPN2Q8IUC4 686 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 FOXP4Q8IVH2 680 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 P3H2Q8IVL5 708 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 DDIASQ8IXT1 998 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 SMCR8Q8TEV9 937 aaPredicted RBP3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 ZFPM2Q8WW38 1151 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 TIFAQ96CG3 184 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 RMI1Q9H9A7 625 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 AS3MTQ9HBK9 375 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 ZNF287Q9HBT7 754 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 RXFP3Q9NSD7 469 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 PLK2Q9NYY3 685 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 PCDHB2Q9Y5E7 798 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 PCDHGB6Q9Y5F9 930 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 INSL5Q9Y5Q6 135 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 KIF26BQ2KJY2 2108 aa3.97□□□□□ -1.77
SMCHD1-206ENST00000581631 MDM4O15151 490 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 GRID2O43424 1007 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 INMTO95050 263 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 IL18RAPO95256 599 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 PAPSS2O95340 614 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 HRGP04196 525 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 FAM193AP78312 1265 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 ISM2Q6H9L7 571 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 KYAT3Q6YP21 454 aaKnown RBP3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 FSTL5Q8N475 847 aaPredicted RBP3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 TMEM174Q8WUU8 243 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 TMEM255BQ8WV15 326 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 APIPQ96GX9 242 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 APOL5Q9BWW9 433 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 PRDM11Q9NQV5 511 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 PLSCR4Q9NRQ2 329 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 VPS4AQ9UN37 437 aa3.96□□□□□ -1.78
SMCHD1-206ENST00000581631 EMSYQ7Z589 1322 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 RPS10-NUDT3A0A1W2PQS6 291 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 ZNF432O94892 652 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 PPP1R3DO95685 299 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 HOXC6P09630 235 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 RHCEP18577 417 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 MATN1P21941 496 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 CARSP49589 748 aaKnown RBP3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 Q0VFX4 171 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 FBXL22Q6P050 247 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 UNC13DQ70J99 1090 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 MORC1Q86VD1 984 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 SKAP1Q86WV1 359 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 ASB12Q8WXK4 309 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 MSLNLQ96KJ4 702 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 MAP6D1Q9H9H5 199 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 SPAG4Q9NPE6 437 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 SIRT3Q9NTG7 399 aaPredicted RBP3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 ITGB1BP2Q9UKP3 347 aa3.95□□□□□ -1.78
SMCHD1-206ENST00000581631 UTS2RQ9UKP6 389 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms