RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TRUB2O95900 331 aaKnown RBP10.28□□□□□ -0.76
GGA3-209ENST00000580646 F9P00740 461 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 FTLP02792 175 aaPredicted RBP10.28□□□□□ -0.76
GGA3-209ENST00000580646 KRT3P12035 628 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 HOXC13P31276 330 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 GBP1P32455 592 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 OPRD1P41143 372 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 PTPN9P43378 593 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 TAF5Q15542 800 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 GAB4Q2WGN9 574 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 SLC25A52Q3SY17 297 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 DCAF6Q58WW2 860 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 C10orf76Q5T2E6 689 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 SYPL2Q5VXT5 272 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 RHBDF2Q6PJF5 856 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 Q6ZNB5 142 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 LONP2Q86WA8 852 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 MIB1Q86YT6 1006 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 TMTC1Q8IUR5 882 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 UNC45BQ8IWX7 931 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 FNIP1Q8TF40 1166 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 EZH1Q92800 747 aaPredicted RBP10.28□□□□□ -0.76
GGA3-209ENST00000580646 SLC39A13Q96H72 371 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 NPY6RQ99463 290 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 CHP1Q99653 195 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.28□□□□□ -0.76
GGA3-209ENST00000580646 SELENOOQ9BVL4 669 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 NHEJ1Q9H9Q4 299 aaPredicted RBP10.28□□□□□ -0.76
GGA3-209ENST00000580646 MRPL47Q9HD33 250 aaKnown RBP10.28□□□□□ -0.76
GGA3-209ENST00000580646 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
GGA3-209ENST00000580646 PARVAQ9NVD7 372 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.28□□□□□ -0.76
GGA3-209ENST00000580646 NCDNQ9UBB6 729 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 STOML2Q9UJZ1 356 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 NUDT5Q9UKK9 219 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 SLC8A2Q9UPR5 921 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 PAXBP1Q9Y5B6 917 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 SCINQ9Y6U3 715 aa10.28□□□□□ -0.76
GGA3-209ENST00000580646 KMT2BQ9UMN6 2715 aaPredicted RBP10.27□□□□□ -0.76
GGA3-209ENST00000580646 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 SLC12A8A0AV02 714 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 ANKRD62A6NC57 917 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 C2CD4BA6NLJ0 364 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 MDM4O15151 490 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 ADH1CP00326 375 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 IRF1P10914 325 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 SLC2A3P11169 496 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 RRM1P23921 792 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 CNR2P34972 360 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 CHKAP35790 457 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 FLT3P36888 993 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 HARS2P49590 506 aaKnown RBP10.27□□□□□ -0.77
GGA3-209ENST00000580646 C2CD6Q53TS8 623 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 LY6G5CQ5SRR4 150 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 CCDC122Q5T0U0 273 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 ACBD5Q5T8D3 534 aaPredicted RBP10.27□□□□□ -0.77
GGA3-209ENST00000580646 DNAJC24Q6P3W2 148 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 STRADAQ7RTN6 431 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 TAC4Q86UU9 113 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 WDR5BQ86VZ2 330 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 BBS7Q8IWZ6 715 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 FAM217AQ8IXS0 508 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 KIAA2013Q8IYS2 634 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 CPXM2Q8N436 756 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 RPLP0P6Q8NHW5 317 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 CCDC26Q8TAB7 109 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 WBP2Q969T9 261 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 TRIM44Q96DX7 344 aaPredicted RBP10.27□□□□□ -0.77
GGA3-209ENST00000580646 FCRL2Q96LA5 508 aaPredicted RBP10.27□□□□□ -0.77
GGA3-209ENST00000580646 SFMBT1Q9UHJ3 866 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 RAB23Q9ULC3 237 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 INTUQ9ULD6 942 aa10.27□□□□□ -0.77
GGA3-209ENST00000580646 EPG5Q9HCE0 2579 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 FANCMQ8IYD8 2048 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 CCDC163A0A0D9SF12 145 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 TMCO5BA8MYB1 307 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 GOLGA8SH3BPF8 625 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 K7EQS6 105 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 GRAP2O75791 330 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 ADH5P11766 374 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 DESP17661 470 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 SDC4P31431 198 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 CCR1P32246 355 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 RFC1P35251 1148 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 CYLC1P35663 651 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 EIF2DP41214 584 aaKnown RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 SLC6A11P48066 632 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 PXNP49023 591 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 ZNF143P52747 638 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 TBX4P57082 545 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 GAD2Q05329 585 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 GFPT1Q06210 699 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 SRSF5Q13243 272 aaKnown RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 MAMLD1Q13495 774 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 SIM2Q14190 667 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 ACAP1Q15027 740 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 LPAL2Q16609 132 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 BRMS1LQ5PSV4 323 aa10.26□□□□□ -0.77
GGA3-209ENST00000580646 OTUD1Q5VV17 481 aaPredicted RBP10.26□□□□□ -0.77
GGA3-209ENST00000580646 TRNP1Q6NT89 227 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms