RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PROSER1Q86XN7 944 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 FAM217AQ8IXS0 508 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 AHI1Q8N157 1196 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 SIX6OS1Q8N1H7 587 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 ANKRD52Q8NB46 1076 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 OR2T3Q8NH03 318 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 PIWIL1Q96J94 861 aaKnown RBP13.96□□□□□ -0.17
TRAF4-214ENST00000580073 CDC6Q99741 560 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 MKRN2Q9H000 416 aaKnown RBP13.96□□□□□ -0.17
TRAF4-214ENST00000580073 SLC6A17Q9H1V8 727 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 LHX5Q9H2C1 402 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 RAB20Q9NX57 234 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 PLA2G4CQ9UP65 541 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 PCDHGB2Q9Y5G2 931 aa13.96□□□□□ -0.17
TRAF4-214ENST00000580073 COL5A1P20908 1838 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-214ENST00000580073 METTL12A8MUP2 240 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 WASH3PC4AMC7 463 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 XPO1O14980 1071 aaKnown RBP13.95□□□□□ -0.18
TRAF4-214ENST00000580073 ZBED1O96006 694 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 KLKB1P03952 638 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 TBXAS1P24557 533 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-214ENST00000580073 ERCC5P28715 1186 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-214ENST00000580073 AFF3P51826 1226 aaKnown RBP13.95□□□□□ -0.18
TRAF4-214ENST00000580073 TKTL1P51854 596 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 ZBTB16Q05516 673 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 FNDC3BQ53EP0 1204 aaKnown RBP13.95□□□□□ -0.18
TRAF4-214ENST00000580073 SGO2Q562F6 1265 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 SASS6Q6UVJ0 657 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 CHCHD4Q8N4Q1 142 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 SETD7Q8WTS6 366 aaKnown RBP13.95□□□□□ -0.18
TRAF4-214ENST00000580073 SNX19Q92543 992 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 GOLGA1Q92805 767 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 SEMA4DQ92854 862 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 SLC35C1Q96A29 364 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 ERLEC1Q96DZ1 483 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 GAREM1Q9H706 876 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 CD93Q9NPY3 652 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 SAMSN1Q9NSI8 373 aaKnown RBP13.95□□□□□ -0.18
TRAF4-214ENST00000580073 LHX6Q9UPM6 363 aa13.95□□□□□ -0.18
TRAF4-214ENST00000580073 CACNA1GO43497 2377 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 ATP5BP06576 529 aaKnown RBP13.94□□□□□ -0.18
TRAF4-214ENST00000580073 SETSIPP0DME0 302 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 PTMSP20962 102 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 PRKCHP24723 683 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 RAD23BP54727 409 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 MARSP56192 900 aaKnown RBP13.94□□□□□ -0.18
TRAF4-214ENST00000580073 NCAPHQ15003 741 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 TRIP4Q15650 581 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-214ENST00000580073 STX1AQ16623 288 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 GOLGA7BQ2TAP0 167 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 ZSCAN23Q3MJ62 389 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 CBWD6Q4V339 395 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 HSP90AA4PQ58FG1 418 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 DCAF17Q5H9S7 520 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-214ENST00000580073 CBWD3Q5JTY5 395 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 CBWD5Q5RIA9 395 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 TCERG1LQ5VWI1 586 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 NUGGCQ68CJ6 796 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 PM20D1Q6GTS8 502 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 FMNL3Q8IVF7 1028 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 TRIM59Q8IWR1 403 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 SLC4A11Q8NBS3 891 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 OR2I1PQ8NGU4 316 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 HSD3B7Q9H2F3 369 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 CNGB3Q9NQW8 809 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 TM7SF3Q9NS93 570 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 ANO10Q9NW15 660 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 KIAA1522Q9P206 1035 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-214ENST00000580073 TSPAN16Q9UKR8 245 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 PCOLCE2Q9UKZ9 415 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 NUMA1Q14980 2115 aa13.94□□□□□ -0.18
TRAF4-214ENST00000580073 ASPMQ8IZT6 3477 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 IRAK2O43187 625 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 DNTTP04053 509 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 MAOBP27338 520 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 HOXD9P28356 352 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 GRIA4P48058 902 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 COPAP53621 1224 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 ADIGQ0VDE8 80 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 CAMK2GQ13555 558 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 SKOR2Q2VWA4 1001 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 ANO6Q4KMQ2 910 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 ADGRF1Q5T601 910 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 CACUL1Q86Y37 369 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 CCDC117Q8IWD4 279 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 UNC45BQ8IWX7 931 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 SCML4Q8N228 414 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 GALNT15Q8N3T1 639 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 ENOX1Q8TC92 643 aaKnown RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 ARID3AQ99856 593 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 DDX50Q9BQ39 737 aaKnown RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 ULBP1Q9BZM6 244 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 BTBD1Q9H0C5 482 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 CCDC86Q9H6F5 360 aaKnown RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 OSGEPQ9NPF4 335 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 ABCC13Q9NSE7 274 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 ARMCX3Q9UH62 379 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
TRAF4-214ENST00000580073 KIAA1257Q9ULG3 409 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms