RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 PNPLA8Q9NP80 782 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 RGS18Q9NS28 235 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 ABCF3Q9NUQ8 709 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 SLC38A7Q9NVC3 462 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 FGFR1OP2Q9NVK5 253 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 OSER1Q9NX31 292 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 MARCH5Q9NX47 278 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 KANSL3Q9P2N6 904 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 SLC17A7Q9P2U7 560 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 PSMC3IPQ9P2W1 217 aaPredicted RBP4.78□□□□□ -1.64
NUP85-213ENST00000579838 SLC24A2Q9UI40 661 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 GGT7Q9UJ14 662 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 NUDT5Q9UKK9 219 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 PCDHB8Q9UN66 801 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 NUMBLQ9Y6R0 609 aa4.78□□□□□ -1.64
NUP85-213ENST00000579838 A0A0A0MRY4 1105 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 WDR27A2RRH5 827 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 A6NNZ2 444 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 MSI1O43347 362 aaKnown RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 SNX3O60493 162 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 TRPA1O75762 1119 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SOAT2O75908 522 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 FBXO21O94952 628 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 TOP3BO95985 862 aaKnown RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 CPP00450 1065 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 VIMP08670 466 aaKnown RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 NCAM1P13591 858 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 TSHRP16473 764 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PRKCHP24723 683 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 ADRA1DP25100 572 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PTPN3P26045 913 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 MGAT1P26572 445 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 STIP1P31948 543 aaKnown RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 CD68P34810 354 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 ARL4AP40617 200 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 CXCR3P49682 368 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 YWHAGP61981 247 aaKnown RBP eCLIP4.77□□□□□ -1.65
NUP85-213ENST00000579838 USP46P62068 366 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 FAM189BP81408 668 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 HTRA3P83110 453 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SCAPQ12770 1279 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 IFRD2Q12894 506 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 RASA2Q15283 850 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 KLHL38Q2WGJ6 581 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 TUBB8Q3ZCM7 444 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SLC39A12Q504Y0 691 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 RNF187Q5TA31 235 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 BSPRYQ5W0U4 402 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 STEAP4Q687X5 459 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PM20D1Q6GTS8 502 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 OVOS1Q6IE37 1185 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 LVRNQ6Q4G3 990 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 CES3Q6UWW8 571 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 RSPO2Q6UXX9 243 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 CDHR3Q6ZTQ4 885 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 C3orf62Q6ZUJ4 267 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 RFX8Q6ZV50 586 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 FAM47EQ6ZV65 393 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 TAOK1Q7L7X3 1001 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 CPLX4Q7Z7G2 160 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 C14orf80Q86SX3 495 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PACS2Q86VP3 889 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 MAP7D3Q8IWC1 876 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 ARHGAP12Q8IWW6 846 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PALM2Q8IXS6 379 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 COLGALT2Q8IYK4 626 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 HACE1Q8IYU2 909 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 CACNA2D3Q8IZS8 1091 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PDCD7Q8N8D1 485 aaKnown RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 BANPQ8N9N5 519 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 COLGALT1Q8NBJ5 622 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SMC1BQ8NDV3 1235 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 MCUQ8NE86 351 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 ZSCAN18Q8TBC5 510 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 TFB1MQ8WVM0 346 aaKnown RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 SLC44A1Q8WWI5 657 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 HTR3CQ8WXA8 447 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 ARNTL2Q8WYA1 636 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 CCT6BQ92526 530 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 CASP10Q92851 521 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PTPRN2Q92932 1015 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 NTAN1Q96AB6 310 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 PGAP3Q96FM1 320 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 CELF6Q96J87 481 aaKnown RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 RMDN2Q96LZ7 410 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 MAGEB18Q96M61 343 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SPATA13Q96N96 652 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 FCRL3Q96P31 734 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 TGS1Q96RS0 853 aaKnown RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 ACBD6Q9BR61 282 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 ZCWPW1Q9H0M4 648 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 STMN4Q9H169 189 aaPredicted RBP4.77□□□□□ -1.65
NUP85-213ENST00000579838 CRISPLD1Q9H336 500 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SPC25Q9HBM1 224 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SLCO1B3Q9NPD5 702 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 CNGB3Q9NQW8 809 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 NDFIP2Q9NV92 336 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 TBC1D13Q9NVG8 400 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 DDIT4Q9NX09 232 aa4.77□□□□□ -1.65
NUP85-213ENST00000579838 SYBUQ9NX95 663 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms