RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 PRR12Q9ULL5 1215 aa16.4■□□□□ 0.22
CCR7-203ENST00000579344 MRPL11Q9Y3B7 192 aaKnown RBP16.4■□□□□ 0.22
CCR7-203ENST00000579344 PCDHA11Q9Y5I1 949 aa16.4■□□□□ 0.22
CCR7-203ENST00000579344 GPC6Q9Y625 555 aaPredicted RBP16.4■□□□□ 0.22
CCR7-203ENST00000579344 STYXL1Q9Y6J8 313 aa16.4■□□□□ 0.22
CCR7-203ENST00000579344 SIPA1L1O43166 1804 aa16.4■□□□□ 0.22
CCR7-203ENST00000579344 DYTNA2CJ06 578 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 LRCH4O75427 683 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 TRPA1O75762 1119 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 VNN1O95497 513 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 XRCC1P18887 633 aaPredicted RBP16.39■□□□□ 0.22
CCR7-203ENST00000579344 NCF2P19878 526 aaPredicted RBP16.39■□□□□ 0.22
CCR7-203ENST00000579344 TPSB2P20231 275 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 FUT4P22083 530 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 PIK3R1P27986 724 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 NDST2P52849 883 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 TPSAB1Q15661 275 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 N4BP2L1Q5TBK1 243 aaPredicted RBP16.39■□□□□ 0.22
CCR7-203ENST00000579344 DARS2Q6PI48 645 aaKnown RBP16.39■□□□□ 0.22
CCR7-203ENST00000579344 ILDR2Q71H61 639 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 CENPSQ8N2Z9 138 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 FIBCD1Q8N539 461 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 PDPRQ8NCN5 879 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 TBC1D15Q8TC07 691 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 SPATA18Q8TC71 538 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 TRUB1Q8WWH5 349 aaKnown RBP16.39■□□□□ 0.22
CCR7-203ENST00000579344 C12orf43Q96C57 262 aaKnown RBP16.39■□□□□ 0.22
CCR7-203ENST00000579344 PHF12Q96QT6 1004 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 TCHPQ9BT92 498 aa16.39■□□□□ 0.22
CCR7-203ENST00000579344 APOBEC3GQ9HC16 384 aaKnown RBP16.39■□□□□ 0.22
CCR7-203ENST00000579344 SAE1Q9UBE0 346 aaPredicted RBP16.39■□□□□ 0.22
CCR7-203ENST00000579344 LOC100653049A0A140TA62 436 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 MYOCOSA0A1B0GUC4 107 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 C7orf72A4D263 438 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 STAM2O75886 525 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 KRT34O76011 436 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 CDH3P22223 829 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 RPL10AP62906 217 aaKnown RBP16.39■□□□□ 0.21
CCR7-203ENST00000579344 DYNLT1P63172 113 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 PPP2R5DQ14738 602 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 DEPDC1Q5TB30 811 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 ARFGAP1Q8N6T3 406 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 CNTD1Q8N815 330 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 SLC4A11Q8NBS3 891 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 BHLHE22Q8NFJ8 381 aaPredicted RBP16.39■□□□□ 0.21
CCR7-203ENST00000579344 ISL2Q96A47 359 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 LENG8Q96PV6 779 aaPredicted RBP16.39■□□□□ 0.21
CCR7-203ENST00000579344 TBC1D22BQ9NU19 505 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 MRGBPQ9NV56 204 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 UTP6Q9NYH9 597 aaKnown RBP16.39■□□□□ 0.21
CCR7-203ENST00000579344 COPG2Q9UBF2 871 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 SUCOQ9UBS9 1254 aaKnown RBP16.39■□□□□ 0.21
CCR7-203ENST00000579344 PCDHAC2Q9Y5I4 1007 aa16.39■□□□□ 0.21
CCR7-203ENST00000579344 MYH9P35579 1960 aaKnown RBP16.39■□□□□ 0.21
CCR7-203ENST00000579344 PSMD12O00232 456 aaPredicted RBP16.38■□□□□ 0.21
CCR7-203ENST00000579344 TOMM70O94826 608 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 FUCA1P04066 466 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 PRKCGP05129 697 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 MX2P20592 715 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 PSMA2P25787 234 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 IL1R2P27930 398 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 POLR2BP30876 1174 aaKnown RBP16.38■□□□□ 0.21
CCR7-203ENST00000579344 TMED10P49755 219 aaKnown RBP16.38■□□□□ 0.21
CCR7-203ENST00000579344 NUDT2P50583 147 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 CCR3P51677 355 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 SLC5A3P53794 718 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 GRSF1Q12849 480 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCR7-203ENST00000579344 PPIL2Q13356 520 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 CEACAM7Q14002 265 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 PDK1Q15118 436 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 CYTH1Q15438 398 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 VPS72Q15906 364 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 KRT80Q6KB66 452 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 CDC42EP5Q6NZY7 148 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 RFX6Q8HWS3 928 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 ASB9Q96DX5 294 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 CCDC97Q96F63 343 aaPredicted RBP16.38■□□□□ 0.21
CCR7-203ENST00000579344 SIGLEC10Q96LC7 697 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 CDRT15Q96T59 188 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 KMT5AQ9NQR1 393 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 C8orf4Q9NR00 106 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 HESX1Q9UBX0 185 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
CCR7-203ENST00000579344 BCLAF3A2AJT9 711 aaKnown RBP16.37■□□□□ 0.21
CCR7-203ENST00000579344 TBC1D12O60347 775 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 RNASEH2AO75792 299 aaKnown RBP16.37■□□□□ 0.21
CCR7-203ENST00000579344 C7P10643 843 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 RALBP11234 206 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 EPHA3P29320 983 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 SNAP25P60880 206 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 TRAP1Q12931 704 aaKnown RBP16.37■□□□□ 0.21
CCR7-203ENST00000579344 MROH9Q5TGP6 573 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 EEPD1Q7L9B9 569 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 LYSMD3Q7Z3D4 306 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 GALNT4Q8N4A0 578 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 MFSD2AQ8NA29 543 aa16.37■□□□□ 0.21
CCR7-203ENST00000579344 MINDY2Q8NBR6 621 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms