RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PAGE1O75459 146 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 APOC2P02655 101 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 MBL2P11226 248 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 KRT10P13645 584 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 FOSL2P15408 326 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 HOXB8P17481 243 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 POU3F3P20264 500 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 TGM2P21980 687 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 CHRNA3P32297 505 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 SLC11A2P49281 568 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 FNTAP49354 379 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 SIX1Q15475 284 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 CCNG2Q16589 344 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 GLE1Q53GS7 698 aaKnown RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 KAZNQ674X7 775 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 SLC9A4Q6AI14 798 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 DRICH1Q6PGQ1 229 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 BZW1Q7L1Q6 419 aaKnown RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 DDX42Q86XP3 938 aaKnown RBP eCLIP13.88□□□□□ -0.196e-8■■□□□ 14.2
SRSF1-202ENST00000578430 PRELID2Q8N945 189 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 MYRIPQ8NFW9 859 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 SHKBP1Q8TBC3 707 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 SMG7Q92540 1137 aaKnown RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 DDX50Q9BQ39 737 aaKnown RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 AP1M1Q9BXS5 423 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 RNF38Q9H0F5 515 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 TASP1Q9H6P5 420 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 LRRC19Q9H756 370 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 PIDD1Q9HB75 910 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 TRPC7Q9HCX4 862 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 ANLNQ9NQW6 1124 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 RBM12Q9NTZ6 932 aaKnown RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 CWC15Q9P013 229 aaKnown RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 FEZ2Q9UHY8 353 aaPredicted RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 MYO7AQ13402 2215 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 OBSL1O75147 1896 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 I6L893 689 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-202ENST00000578430 FGF10O15520 208 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-202ENST00000578430 DAPK3O43293 454 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 ZNF189O75820 626 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-202ENST00000578430 HOXC13P31276 330 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 NR2C2P49116 596 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 TPI1P60174 286 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 CYP4F8P98187 520 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 LMNB2Q03252 620 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 C2orf54Q08AI8 447 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 HYAL1Q12794 435 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 MMRN1Q13201 1228 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 DPYSQ14117 519 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 PRSS36Q5K4E3 855 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 MANEALQ5VSG8 457 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 TXNDC8Q6A555 127 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 LRRC31Q6UY01 552 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 RFX8Q6ZV50 586 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 ANKS1BQ7Z6G8 1248 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 ADAT2Q7Z6V5 191 aaKnown RBP13.87□□□□□ -0.19
SRSF1-202ENST00000578430 PYROXD2Q8N2H3 581 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 ARL14EPQ8N8R7 260 aaPredicted RBP13.87□□□□□ -0.19
SRSF1-202ENST00000578430 VN1R2Q8NFZ6 395 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 PCDH19Q8TAB3 1148 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 CCDC26Q8TAB7 109 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 UBXN4Q92575 508 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 MAGOHBQ96A72 148 aaKnown RBP13.87□□□□□ -0.19
SRSF1-202ENST00000578430 TBC1D31Q96DN5 1066 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 HERPUD2Q9BSE4 406 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 HCFC1R1Q9NWW0 138 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 ZNF510Q9Y2H8 683 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 RAD54BQ9Y620 910 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 DENND4CQ5VZ89 1909 aa13.87□□□□□ -0.19
SRSF1-202ENST00000578430 TCRBV7S2A1N4TA0A589 114 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 CREB3O43889 395 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 ACSL4O60488 711 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 MOSPD3O75425 235 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 STC2O76061 302 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 MOCS2O96007 188 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-202ENST00000578430 CKMP06732 381 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 HMBSP08397 361 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 GOT1P17174 413 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 WEE1P30291 646 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■■□□ 15.1
SRSF1-202ENST00000578430 ADAM15Q13444 863 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 DHX34Q14147 1143 aaKnown RBP13.86□□□□□ -0.19
SRSF1-202ENST00000578430 GPR158Q5T848 1215 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 ANKRD54Q6NXT1 300 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 MAATS1Q7Z4T9 603 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 GRASPQ7Z6J2 395 aaPredicted RBP13.86□□□□□ -0.19
SRSF1-202ENST00000578430 ZDHHC14Q8IZN3 488 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 PQLC3Q8N755 202 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 PLD5Q8N7P1 536 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 MAB21L3Q8N8X9 362 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 P3H4Q92791 437 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 ZFRQ96KR1 1074 aaKnown RBP13.86□□□□□ -0.19
SRSF1-202ENST00000578430 SIK2Q9H0K1 926 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 IGFLR1Q9H665 355 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 CATSPERBQ9H7T0 1116 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 ARHGEF4Q9NR80 690 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 TMPRSS4Q9NRS4 437 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 PPARGC1AQ9UBK2 798 aaKnown RBP13.86□□□□□ -0.19
SRSF1-202ENST00000578430 PCYOX1Q9UHG3 505 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms