RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 RAD54BQ9Y620 910 aa16.73■□□□□ 0.27
VAPA-204ENST00000577901 SRRM3A6NNA2 597 aaPredicted RBP16.72■□□□□ 0.27
VAPA-204ENST00000577901 BECN2A8MW95 431 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 CALCAP01258 141 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 SYPP08247 313 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 LCP1P13796 627 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 DGKGP49619 791 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 COPB1P53618 953 aaKnown RBP16.72■□□□□ 0.27
VAPA-204ENST00000577901 BPIFB4P59827 614 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 YWHAGP61981 247 aaKnown RBP eCLIP16.72■□□□□ 0.27
VAPA-204ENST00000577901 ADIGQ0VDE8 80 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 NCAPHQ15003 741 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 C10orf120Q5SQS8 335 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 PMF1Q6P1K2 205 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 SCD5Q86SK9 330 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 OR2I1PQ8NGU4 316 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 BHMTQ93088 406 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 SLC6A17Q9H1V8 727 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 CACNA2D2Q9NY47 1150 aa16.72■□□□□ 0.27
VAPA-204ENST00000577901 SYCE3A1L190 88 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 H0Y626 953 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 FOXN3O00409 490 aaPredicted RBP16.71■□□□□ 0.27
VAPA-204ENST00000577901 MDM4O15151 490 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 NDUFS2O75306 463 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 TRIM16O95361 564 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 CISD3P0C7P0 127 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 CD59P13987 128 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 ZNF18P17022 549 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 RDXP35241 583 aaKnown RBP16.71■□□□□ 0.27
VAPA-204ENST00000577901 RGS7P49802 495 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 ZNF165P49910 485 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 FAM193AP78312 1265 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 RAPGEF1Q13905 1077 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 MEA1Q16626 185 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 RSRC2Q7L4I2 434 aaKnown RBP16.71■□□□□ 0.27
VAPA-204ENST00000577901 RGL4Q8IZJ4 473 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 SCML4Q8N228 414 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 ZNF419Q96HQ0 510 aaPredicted RBP16.71■□□□□ 0.27
VAPA-204ENST00000577901 MRGPRX1Q96LB2 322 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 CD93Q9NPY3 652 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 PLCB1Q9NQ66 1216 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 DNAAF2Q9NVR5 837 aaKnown RBP16.71■□□□□ 0.27
VAPA-204ENST00000577901 NUDT5Q9UKK9 219 aa16.71■□□□□ 0.27
VAPA-204ENST00000577901 IGF2RP11717 2491 aa16.71■□□□□ 0.26
VAPA-204ENST00000577901 DMXL2Q8TDJ6 3036 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 PCDH15Q96QU1 1955 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 WASH3PC4AMC7 463 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 GFRA2O00451 464 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 UCHL3P15374 230 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 GPD2P43304 727 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 ACADSBP45954 432 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 DRAP1Q14919 205 aaPredicted RBP16.7■□□□□ 0.26
VAPA-204ENST00000577901 PLEKHG6Q3KR16 790 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 SYCP2LQ5T4T6 812 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 DPY19L2P1Q6NXN4 242 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 DENND1BQ6P3S1 775 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 KIAA1324Q6UXG2 1013 aaKnown RBP16.7■□□□□ 0.26
VAPA-204ENST00000577901 Q6ZNB5 142 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 STK32AQ8WU08 396 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 IRGQQ8WZA9 623 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 GOLGA1Q92805 767 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 PCMTD1Q96MG8 357 aaPredicted RBP16.7■□□□□ 0.26
VAPA-204ENST00000577901 STK33Q9BYT3 514 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 ACP6Q9NPH0 428 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 ST7Q9NRC1 585 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 PLK2Q9NYY3 685 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 AJAP1Q9UKB5 411 aaPredicted RBP16.7■□□□□ 0.26
VAPA-204ENST00000577901 STRIP2Q9ULQ0 834 aa16.7■□□□□ 0.26
VAPA-204ENST00000577901 ASCC3Q8N3C0 2202 aaKnown RBP16.7■□□□□ 0.26
VAPA-204ENST00000577901 FREM2Q5SZK8 3169 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 LGALS16A8MUM7 142 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 FBXO21O94952 628 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 KRT9P35527 623 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 COG7P83436 770 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 UBXN1Q04323 297 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 HNRNPDQ14103 355 aaKnown RBP16.69■□□□□ 0.26
VAPA-204ENST00000577901 BSPRYQ5W0U4 402 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 DHX40Q8IX18 779 aaKnown RBP16.69■□□□□ 0.26
VAPA-204ENST00000577901 FAM71AQ8IYT1 594 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 CHCHD4Q8N4Q1 142 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 RNF139Q8WU17 664 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 NDRG1Q92597 394 aaKnown RBP16.69■□□□□ 0.26
VAPA-204ENST00000577901 FOXJ1Q92949 421 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 FUCA2Q9BTY2 467 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 NAA15Q9BXJ9 866 aaKnown RBP16.69■□□□□ 0.26
VAPA-204ENST00000577901 ABCC13Q9NSE7 274 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 OLA1Q9NTK5 396 aaKnown RBP16.69■□□□□ 0.26
VAPA-204ENST00000577901 SUSD2Q9UGT4 822 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 RASAL2Q9UJF2 1139 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 FBXO10Q9UK96 956 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 DAAM1Q9Y4D1 1078 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 FHOD1Q9Y613 1164 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 STON1Q9Y6Q2 735 aa16.69■□□□□ 0.26
VAPA-204ENST00000577901 CEP192Q8TEP8 1941 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 ADAMTS9Q9P2N4 1935 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 FAM221BA6H8Z2 402 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 PIK3R2O00459 728 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 SH3BP5O60239 455 aa16.68■□□□□ 0.26
VAPA-204ENST00000577901 STC2O76061 302 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms