RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 TRIM9Q9C026 710 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 SMYD3Q9H7B4 428 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 ITM2CQ9NQX7 267 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 AGPAT3Q9NRZ7 376 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 PCMTD2Q9NV79 361 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 WSB2Q9NYS7 404 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 IL37Q9NZH6 218 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 KIAA1522Q9P206 1035 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 EIF2B4Q9UI10 523 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 NUDT5Q9UKK9 219 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 PCDHB11Q9Y5F2 797 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 CHD8Q9HCK8 2581 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 THADAQ6YHU6 1953 aa7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 CNOT1A5YKK6 2376 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-212ENST00000577721 EML5Q05BV3 1969 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 A0A087X0B3 334 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 A0A1B0GVT2 93 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 A0A1W2PQH9 124 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 FAM149AA5PLN7 773 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 METTL12A8MUP2 240 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 MDM4O15151 490 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 EIF3DO15371 548 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 TGFB1I1O43294 461 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 EXOC3O60645 756 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 CBFA2T3O75081 653 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 BEST1O76090 585 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 CYBBP04839 570 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 HMBSP08397 361 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 ZDHHC11BP0C7U3 371 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 FAM200BP0CF97 657 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 RALAP11233 206 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 RARGP13631 454 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 PDCP20941 246 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 ACO1P21399 889 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 ADORA2BP29275 332 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 HOXD13P35453 343 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 CASP4P49662 377 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 CSNK1EP49674 416 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 TPMTP51580 245 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 NDST1P52848 882 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 NCOA4Q13772 614 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 E2F5Q15329 346 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 TEAD4Q15561 434 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 FAM26FQ5R3K3 315 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 TMPRSS7Q7RTY8 843 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 TADA2BQ86TJ2 420 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 CACUL1Q86Y37 369 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 FUKQ8N0W3 1084 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 GALNT15Q8N3T1 639 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 ENGASEQ8NFI3 743 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 ZNF507Q8TCN5 953 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 SLC2A14Q8TDB8 520 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 SMOQ99835 787 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 DUSP9Q99956 384 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 CIPCQ9C0C6 399 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 XYLT2Q9H1B5 865 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 TNMDQ9H2S6 317 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 UPF2Q9HAU5 1272 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 CD248Q9HCU0 757 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 FAM49BQ9NUQ9 324 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 MARK1Q9P0L2 795 aa7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 USP36Q9P275 1121 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 FNDC3AQ9Y2H6 1198 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-212ENST00000577721 FAM92AA1XBS5 289 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 KCNJ18B7U540 433 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 M0R082 166 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 KCNK3O14649 394 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 NPC1O15118 1278 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 FLRT2O43155 660 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 CYP26A1O43174 497 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 TNFSF14O43557 240 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 GREM1O60565 184 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 STAU1O95793 577 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 EPHX1P07099 455 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 ZNF883P0CG24 379 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 CHKAP35790 457 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 IL12RB1P42701 662 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 AFF3P51826 1226 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 ZNF132P52740 706 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 AP3M2P53677 418 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 SNRPFP62306 86 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 COG7P83436 770 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 TNP2Q05952 138 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 C19orf57Q0VDD7 668 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 SLC39A14Q15043 492 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 STK38Q15208 465 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 SGSM1Q2NKQ1 1148 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 ADAT2Q7Z6V5 191 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 C12orf29Q8N999 325 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 ZMIZ2Q8NF64 920 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 C1orf216Q8TAB5 229 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 ZNF417Q8TAU3 575 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 DHX58Q96C10 678 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 BBC3Q96PG8 261 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 ZNF587Q96SQ5 575 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 MKRN2Q9H000 416 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 SDCBP2Q9H190 292 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 NMUR1Q9HB89 426 aa7.2□□□□□ -1.26
SMARCE1-212ENST00000577721 OSER1Q9NX31 292 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms