RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SELENOOQ9BVL4 669 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 BBS2Q9BXC9 721 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 SPHK2Q9NRA0 654 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 OLA1Q9NTK5 396 aaKnown RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 ASNSD1Q9NWL6 643 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 GPATCH2LQ9NWQ4 482 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 THG1LQ9NWX6 298 aaKnown RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 DLGAP2Q9P1A6 1054 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 WNT16Q9UBV4 365 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 CNOT8Q9UFF9 292 aaKnown RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 ZMYM5Q9UJ78 669 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 HCN2Q9UL51 889 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 TLR6Q9Y2C9 796 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 HBS1LQ9Y450 684 aaKnown RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 PAXBP1Q9Y5B6 917 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 EPN1Q9Y6I3 576 aaPredicted RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 DOCK4Q8N1I0 1966 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 KANSL1LA0AUZ9 987 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 FAM170BA6NMN3 283 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 SART1O43290 800 aaKnown RBP8.2□□□□□ -1.1
CCDC40-215ENST00000576033 ACSL4O60488 711 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 TBL1XO60907 577 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 TULP3O75386 442 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 NFATC1O95644 943 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 CALB1P05937 261 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 TYRP14679 529 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 AOC1P19801 751 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 TACR2P21452 398 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 NOS2P35228 1153 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 GALK1P51570 392 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 GSCP56915 257 aaPredicted RBP8.2□□□□□ -1.1
CCDC40-215ENST00000576033 COG7P83436 770 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 PFKPQ01813 784 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 DEUP1Q05D60 604 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 DMWDQ09019 674 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 MAMLD1Q13495 774 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 CCINQ13939 588 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 GEN1Q17RS7 908 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 MS4A13Q5J8X5 152 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 CCDC122Q5T0U0 273 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 EMC10Q5UCC4 262 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 TSSK4Q6SA08 328 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 TADA2BQ86TJ2 420 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 CHSY1Q86X52 802 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 DDX42Q86XP3 938 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC40-215ENST00000576033 ETFBKMTQ8IXQ9 262 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 FAM217AQ8IXS0 508 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 PYROXD2Q8N2H3 581 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 FBXL6Q8N531 539 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 ZNF276Q8N554 614 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 ARFGAP1Q8N6T3 406 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 NETO2Q8NC67 525 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 C3orf20Q8ND61 904 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 ACRBPQ8NEB7 543 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 OR52K2Q8NGK3 314 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 FAM172AQ8WUF8 416 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 SORCS1Q8WY21 1168 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 IGSF8Q969P0 613 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 NT5C3BQ969T7 300 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 CDK5RAP1Q96SZ6 601 aaKnown RBP8.2□□□□□ -1.1
CCDC40-215ENST00000576033 ISCUQ9H1K1 167 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 NHEJ1Q9H9Q4 299 aaPredicted RBP8.2□□□□□ -1.1
CCDC40-215ENST00000576033 TRPV5Q9NQA5 729 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 STIM2Q9P246 746 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 LSM7Q9UK45 103 aaKnown RBP8.2□□□□□ -1.1
CCDC40-215ENST00000576033 NEU3Q9UQ49 428 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 HS3ST4Q9Y661 456 aa8.2□□□□□ -1.1
CCDC40-215ENST00000576033 RCCD1A6NED2 376 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 KCNU1A8MYU2 1149 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PRR33A8MZF0 331 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PRRT4C9JH25 899 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 FAM72CH0Y354 149 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 K7EQS6 105 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 HOXC11O43248 304 aaPredicted RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CTIFO43310 598 aaKnown RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 GPR37L1O60883 481 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 RNF40O75150 1001 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 RTN2O75298 545 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PAGE1O75459 146 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CNTN5O94779 1100 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 ADH1CP00326 375 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PENKP01210 267 aaPredicted RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 GLI1P08151 1106 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CHRNB1P11230 501 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 KRT3P12035 628 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 HNRNPLP14866 589 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PDGFRAP16234 1089 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 GPD1P21695 349 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CD70P32970 193 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 RDXP35241 583 aaKnown RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CYLC1P35663 651 aaPredicted RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 WASP42768 502 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 HARS2P49590 506 aaKnown RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 GALCP54803 685 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PRKCQQ04759 706 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 MTAPQ13126 283 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CA9Q16790 459 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 SLC25A52Q3SY17 297 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 FSCBQ5H9T9 825 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms