RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 HMGXB4Q9UGU5 601 aa14.95□□□□□ -0.02
SCARF1-209ENST00000576012 EMCNQ9ULC0 261 aa14.95□□□□□ -0.02
SCARF1-209ENST00000576012 PCDHA10Q9Y5I2 948 aa14.95□□□□□ -0.02
SCARF1-209ENST00000576012 CENPFP49454 3210 aa14.95□□□□□ -0.02
SCARF1-209ENST00000576012 ARHGAP10A1A4S6 786 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 RGL2O15211 777 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 ALDOAP04075 364 aaKnown RBP14.94□□□□□ -0.02
SCARF1-209ENST00000576012 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 PHKA2P46019 1235 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 MPP3Q13368 585 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 SLC9A4Q6AI14 798 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 KRT80Q6KB66 452 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 PGM2L1Q6PCE3 622 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 RNF168Q8IYW5 571 aaPredicted RBP14.94□□□□□ -0.02
SCARF1-209ENST00000576012 ATP6V1E2Q96A05 226 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 PPWD1Q96BP3 646 aaKnown RBP14.94□□□□□ -0.02
SCARF1-209ENST00000576012 NUF2Q9BZD4 464 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 KLC2Q9H0B6 622 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 PCDHAC1Q9H158 963 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 ST6GALNAC4Q9H4F1 302 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 PSMD13Q9UNM6 376 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 ADAMTSL1Q8N6G6 1762 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 STRNO43815 780 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 USP12O75317 370 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 CHRNGP07510 517 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 PDGFRAP16234 1089 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 GARTP22102 1010 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 CRHR1P34998 444 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 GLRBP48167 497 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 EMP3P54852 163 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 CA9Q16790 459 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 ZNF554Q86TJ5 538 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 ZNF410Q86VK4 478 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 GIPC3Q8TF64 312 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 KCNK16Q96T55 309 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 NPAS2Q99743 824 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 TMEM39BQ9GZU3 492 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 TRPV6Q9H1D0 765 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 ZNF180Q9UJW8 692 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 DMTF1Q9Y222 760 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 TMX2Q9Y320 296 aa14.94□□□□□ -0.02
SCARF1-209ENST00000576012 TBXAS1P24557 533 aaPredicted RBP14.93□□□□□ -0.02
SCARF1-209ENST00000576012 PCLAFQ15004 111 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 ZNF699Q32M78 642 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 TSPAN14Q8NG11 270 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 JADE3Q92613 823 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 SORT1Q99523 831 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 CCDC28BQ9BUN5 200 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 NRDE2Q9H7Z3 1164 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 NDUFA13Q9P0J0 144 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 SYNJ2BP-COX16A0A087WUM0 186 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 C1QAP02745 245 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 CDH2P19022 906 aaPredicted RBP14.93□□□□□ -0.02
SCARF1-209ENST00000576012 ATP1A4Q13733 1029 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 PGM5Q15124 567 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 OGFRL1Q5TC84 451 aaPredicted RBP14.93□□□□□ -0.02
SCARF1-209ENST00000576012 SP8Q8IXZ3 490 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 PLD6Q8N2A8 252 aaKnown RBP14.93□□□□□ -0.02
SCARF1-209ENST00000576012 AGAP3Q96P47 875 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 YIPF2Q9BWQ6 316 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 XPNPEP3Q9NQH7 507 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 RRN3Q9NYV6 651 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 COX16Q9P0S2 106 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 SNX13Q9Y5W8 968 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 NFASCO94856 1347 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 M0QYV0 167 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 PRPSAP2O60256 369 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 GSRP00390 522 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 MT-CO1P00395 513 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 PSMC3P17980 439 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 ATXN1P54253 815 aaKnown RBP14.93□□□□□ -0.02
SCARF1-209ENST00000576012 TBCCQ15814 346 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 FAM91A1Q658Y4 838 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 NAPRTQ6XQN6 538 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 CLVS1Q8IUQ0 354 aaPredicted RBP14.93□□□□□ -0.02
SCARF1-209ENST00000576012 DSELQ8IZU8 1212 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 PQLC3Q8N755 202 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 NLRP7Q8WX94 980 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 ATP2A3Q93084 1043 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 PAIP1Q9H074 479 aaKnown RBP14.93□□□□□ -0.02
SCARF1-209ENST00000576012 MFHAS1Q9Y4C4 1052 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 UBIAD1Q9Y5Z9 338 aa14.93□□□□□ -0.02
SCARF1-209ENST00000576012 TCRBV5S1A1TA0A578 114 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 TPST1O60507 370 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 PLIN3O60664 434 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 FBXO21O94952 628 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 TRUB2O95900 331 aaKnown RBP14.92□□□□□ -0.02
SCARF1-209ENST00000576012 CCDC166P0CW27 439 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 THRAP10827 490 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 MTTPP55157 894 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 GBE1Q04446 702 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 ART3Q13508 389 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 ADGRG6Q86SQ4 1221 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 SPATA6LQ8N4H0 392 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 CIB1Q99828 191 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 TMEM79Q9BSE2 394 aa14.92□□□□□ -0.02
SCARF1-209ENST00000576012 MRPS26Q9BYN8 205 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms