RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 KCNV2Q8TDN2 545 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 SLC2A11Q9BYW1 496 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 IFNKQ9P0W0 207 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 STARD13Q9Y3M8 1113 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 PRR23AA6NEV1 266 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 SGK1O00141 431 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 APBB3O95704 486 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 LMNAP02545 664 aaKnown RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 CENPCQ03188 943 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 GEN1Q17RS7 908 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 SFMBT2Q5VUG0 894 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 EGFLAMQ63HQ2 1017 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 RAP1GAP2Q684P5 730 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 ASCL5Q7RTU5 278 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 IRF2BP2Q7Z5L9 587 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 PHLDB2Q86SQ0 1253 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 WDR5BQ86VZ2 330 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 HJURPQ8NCD3 748 aaPredicted RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 PRICKLE1Q96MT3 831 aaPredicted RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 NPY6RQ99463 290 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 IRX2Q9BZI1 471 aaPredicted RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 TTYH3Q9C0H2 523 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 METTL5Q9NRN9 209 aaKnown RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 STIM2Q9P246 746 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 FLT3P36888 993 aa21.47■■□□□ 1.03
HCFC1R1-208ENST00000575214 CRY1Q16526 586 aa21.47■■□□□ 1.03
HCFC1R1-208ENST00000575214 MS4A13Q5J8X5 152 aa21.47■■□□□ 1.03
HCFC1R1-208ENST00000575214 MPP7Q5T2T1 576 aa21.47■■□□□ 1.03
HCFC1R1-208ENST00000575214 LGI2Q8N0V4 545 aa21.47■■□□□ 1.03
HCFC1R1-208ENST00000575214 NUP58Q9BVL2 599 aa21.47■■□□□ 1.03
HCFC1R1-208ENST00000575214 EDEM3Q9BZQ6 932 aa21.47■■□□□ 1.03
HCFC1R1-208ENST00000575214 ADAM22Q9P0K1 906 aa21.47■■□□□ 1.03
HCFC1R1-208ENST00000575214 MYO15AQ9UKN7 3530 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 KCNU1A8MYU2 1149 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 ADAM23O75077 832 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 TFE3P19532 575 aaPredicted RBP21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 TACR2P21452 398 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 TNFAIP3P21580 790 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 PBX1P40424 430 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 WASP42768 502 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 DGKEP52429 567 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 RPS24P62847 133 aaKnown RBP21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 FIGNQ5HY92 759 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 OTUD1Q5VV17 481 aaPredicted RBP21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 TMEM92Q6UXU6 159 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 SND1Q7KZF4 910 aaKnown RBP eCLIP21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 CHPFQ8IZ52 775 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 RNF214Q8ND24 703 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 UCMAQ8WVF2 138 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 MYEOVQ96EZ4 313 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 TBCBQ99426 244 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 CALCOCO1Q9P1Z2 691 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 TMEM59LQ9UK28 342 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 HCN2Q9UL51 889 aa21.46■■□□□ 1.03
HCFC1R1-208ENST00000575214 CCDC163A0A0D9SF12 145 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 F5H5T6 163 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 AXIN1O15169 862 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 CALB1P05937 261 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 TPM3P06753 285 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 NTSR1P30989 418 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 DEUP1Q05D60 604 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 PTP4A2Q12974 167 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 SRSF5Q13243 272 aaKnown RBP21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 SLC25A52Q3SY17 297 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 SDE2Q6IQ49 451 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 ANO7Q6IWH7 933 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 PHF13Q86YI8 300 aaPredicted RBP21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 MFN1Q8IWA4 741 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 EMC1Q8N766 993 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 ACOX2Q99424 681 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 ADAM33Q9BZ11 813 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 CIPCQ9C0C6 399 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 EPC1Q9H2F5 836 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 POLMQ9NP87 494 aaPredicted RBP21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 PIGVQ9NUD9 493 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 ABCB8Q9NUT2 735 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 AIPL1Q9NZN9 384 aa21.45■■□□□ 1.02
HCFC1R1-208ENST00000575214 ALDH1A2O94788 518 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 F9P00740 461 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 HOXB2P14652 356 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 HNRNPLP14866 589 aaKnown RBP eCLIP21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 HLA-FP30511 346 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 CNR2P34972 360 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 MTA1Q13330 715 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 E4F1Q66K89 784 aaPredicted RBP21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 TRNP1Q6NT89 227 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 PRR23BQ6ZRT6 265 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 USP34Q70CQ2 3546 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 ARCQ7LC44 396 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 CCDC117Q8IWD4 279 aaPredicted RBP21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 FANCMQ8IYD8 2048 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 CFAP52Q8N1V2 620 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 CARNMT1Q8N4J0 409 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 ZNF557Q8N988 423 aaPredicted RBP21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 WFDC5Q8TCV5 224 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 NT5C3BQ969T7 300 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 PGAP3Q96FM1 320 aaPredicted RBP21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 CFAP57Q96MR6 1250 aa21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 XPO4Q9C0E2 1151 aaKnown RBP21.44■■□□□ 1.02
HCFC1R1-208ENST00000575214 HAUS4Q9H6D7 363 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms