RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ADGRG2Q8IZP9 1017 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 LINC00597Q9H2U6 94 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 EBF3Q9H4W6 596 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 LZTFL1Q9NQ48 299 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 ANLNQ9NQW6 1124 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 PCSK1NQ9UHG2 260 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 FZD10Q9ULW2 581 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 GUCA1BQ9UMX6 200 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 HS3ST4Q9Y661 456 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 F5H5T6 163 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 I6L893 689 aaPredicted RBP17.68■□□□□ 0.42
NUP88-210ENST00000574867 TACR2P21452 398 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 BOLA3Q53S33 107 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 DAB2IPQ5VWQ8 1189 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 SYCE1Q8N0S2 351 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 CSGALNACT1Q8TDX6 532 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 TEKT4Q8WW24 435 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 PEBP4Q96S96 227 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 PRMT1Q99873 361 aaKnown RBP17.68■□□□□ 0.42
NUP88-210ENST00000574867 OSBPL2Q9H1P3 480 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 HPS4Q9NQG7 708 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 SPHK2Q9NRA0 654 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 UNC80Q8N2C7 3258 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 COL4A3Q01955 1670 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 TICRRQ7Z2Z1 1910 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 TYW5A2RUC4 315 aaKnown RBP17.68■□□□□ 0.42
NUP88-210ENST00000574867 SPOPO43791 374 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 CYBBP04839 570 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 CYP17A1P05093 508 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 KRT7P08729 469 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 ARSAP15289 507 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 SSR1P43307 286 aaKnown RBP17.68■□□□□ 0.42
NUP88-210ENST00000574867 MLLT6P55198 1093 aaPredicted RBP17.68■□□□□ 0.42
NUP88-210ENST00000574867 NRG1Q02297 640 aaPredicted RBP17.68■□□□□ 0.42
NUP88-210ENST00000574867 NR1H3Q13133 447 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 RUNX3Q13761 415 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 HS1BP3Q53T59 392 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 ERMARDQ5T6L9 678 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 RAP1GAP2Q684P5 730 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 CYP4V2Q6ZWL3 525 aaPredicted RBP17.68■□□□□ 0.42
NUP88-210ENST00000574867 POLNQ7Z5Q5 900 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 SNRNP25Q9BV90 132 aaKnown RBP17.68■□□□□ 0.42
NUP88-210ENST00000574867 ECT2Q9H8V3 914 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 MARK1Q9P0L2 795 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 AP4E1Q9UPM8 1137 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 MYO10Q9HD67 2058 aa17.68■□□□□ 0.42
NUP88-210ENST00000574867 GFRA2O00451 464 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 MOCS3O95396 460 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 COMTP21964 271 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 SLC6A4P31645 630 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 DHCR24Q15392 516 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 ITPRIPL2Q3MIP1 535 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 MPPE1Q53F39 396 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 RABGAP1LQ5R372 815 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 TTC39BQ5VTQ0 682 aaPredicted RBP17.67■□□□□ 0.42
NUP88-210ENST00000574867 UBALD2Q8IYN6 164 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 LRRC57Q8N9N7 239 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 UHRF1Q96T88 793 aaPredicted RBP17.67■□□□□ 0.42
NUP88-210ENST00000574867 SIK2Q9H0K1 926 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 TMPRSS4Q9NRS4 437 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 PYCARDQ9ULZ3 195 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 ALG6Q9Y672 507 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 GRID2IPA4D2P6 1211 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 GOLGA6L9A6NEM1 432 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 TCF4P15884 667 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 IL1R2P27930 398 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 VCPP55072 806 aaKnown RBP17.67■□□□□ 0.42
NUP88-210ENST00000574867 TNK2Q07912 1038 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 AUHQ13825 339 aaKnown RBP17.67■□□□□ 0.42
NUP88-210ENST00000574867 LY6G5CQ5SRR4 150 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 LRRC38Q5VT99 294 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 LRRC31Q6UY01 552 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 HJURPQ8NCD3 748 aaPredicted RBP17.67■□□□□ 0.42
NUP88-210ENST00000574867 KIAA1524Q8TCG1 905 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 TRIM44Q96DX7 344 aaPredicted RBP17.67■□□□□ 0.42
NUP88-210ENST00000574867 ALS2CR12Q96Q35 445 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 OR12D3Q9UGF7 316 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 CAPN6Q9Y6Q1 641 aa17.67■□□□□ 0.42
NUP88-210ENST00000574867 GOLGA6L7A0A1B0GV03 622 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 HOXC11O43248 304 aaPredicted RBP17.66■□□□□ 0.42
NUP88-210ENST00000574867 NARSO43776 548 aaKnown RBP17.66■□□□□ 0.42
NUP88-210ENST00000574867 ADH5P11766 374 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 ZNF135P52742 658 aaPredicted RBP17.66■□□□□ 0.42
NUP88-210ENST00000574867 GAD2Q05329 585 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 MPP7Q5T2T1 576 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 RFWD3Q6PCD5 774 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 RHBDF2Q6PJF5 856 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 CPNE8Q86YQ8 564 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 RHOT1Q8IXI2 618 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 LGI2Q8N0V4 545 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 UBE2Q2Q8WVN8 375 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 PRICKLE1Q96MT3 831 aaPredicted RBP17.66■□□□□ 0.42
NUP88-210ENST00000574867 NECAB3Q96P71 396 aaPredicted RBP17.66■□□□□ 0.42
NUP88-210ENST00000574867 ZWILCHQ9H900 591 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 GTSE1Q9NYZ3 720 aa17.66■□□□□ 0.42
NUP88-210ENST00000574867 PSTPIP1O43586 416 aa17.65■□□□□ 0.42
NUP88-210ENST00000574867 L1CAMP32004 1257 aa17.65■□□□□ 0.42
NUP88-210ENST00000574867 HTR7P34969 479 aa17.65■□□□□ 0.42
NUP88-210ENST00000574867 TAS2R40P59535 323 aa17.65■□□□□ 0.42
NUP88-210ENST00000574867 DPYSL2Q16555 572 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms