RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CSPG4P5Q96PW8 444 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 KCTD15Q96SI1 283 aaPredicted RBP19.63■□□□□ 0.73
SCARF1-206ENST00000573852 EBF3Q9H4W6 596 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 ITGA11Q9UKX5 1188 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 A6NJR5 290 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 HBP1O60381 514 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 STILQ15468 1287 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 FAM187BQ17R55 369 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 PPM1JQ5JR12 505 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 VWA5B1Q5TIE3 1220 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 AAGABQ6PD74 315 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 NETO2Q8NC67 525 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 GBP5Q96PP8 586 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 CAMKK2Q96RR4 588 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 NFKBIZQ9BYH8 718 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 AP4E1Q9UPM8 1137 aa19.63■□□□□ 0.73
SCARF1-206ENST00000573852 RNASEH1O60930 286 aaKnown RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 PDE5AO76074 875 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 SERPINE1P05121 402 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 YY1P25490 414 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 NR2C2P49116 596 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 COPAP53621 1224 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 EPHB1P54762 984 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 SESN2P58004 480 aaPredicted RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 CCNIQ14094 377 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 LRRC36Q1X8D7 754 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 NOL9Q5SY16 702 aaKnown RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 NCBP2-AS2Q69YL0 99 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 ADGRG6Q86SQ4 1221 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 SESTD1Q86VW0 696 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 ARNTL2Q8WYA1 636 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 CXCL16Q9H2A7 254 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 SMARCAD1Q9H4L7 1026 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 STN1Q9H668 368 aaKnown RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 IL1RAPL1Q9NZN1 696 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 CCNT2O60583 730 aaKnown RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 SNUPNO95149 360 aaKnown RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 PROCP04070 461 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 MGAT1P26572 445 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 SARNPP82979 210 aaKnown RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 DHDDSQ86SQ9 333 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 FBXO16Q8IX29 292 aaPredicted RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 CCDC185Q8N715 623 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 ZFAND2BQ8WV99 257 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 HTR3CQ8WXA8 447 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 PPP2R3CQ969Q6 453 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 LGMNQ99538 433 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 C11orf84Q9BUA3 381 aaPredicted RBP19.62■□□□□ 0.73
SCARF1-206ENST00000573852 SCN1AP35498 2009 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 PTPRFP10586 1907 aa19.62■□□□□ 0.73
SCARF1-206ENST00000573852 ZNF195O14628 629 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 ADCY6O43306 1168 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 ZFXP17010 805 aaPredicted RBP19.61■□□□□ 0.73
SCARF1-206ENST00000573852 PGM2L1Q6PCE3 622 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 APOBEC3FQ8IUX4 373 aaKnown RBP19.61■□□□□ 0.73
SCARF1-206ENST00000573852 PYROXD2Q8N2H3 581 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 TMEM216Q9P0N5 145 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 DCDC2Q9UHG0 476 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 E2F8A0AVK6 867 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 PPEF2O14830 753 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 ITGA2BP08514 1039 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 HNRNPDQ14103 355 aaKnown RBP19.61■□□□□ 0.73
SCARF1-206ENST00000573852 PDSS2Q86YH6 399 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 COLGALT1Q8NBJ5 622 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 SLC26A7Q8TE54 656 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 FAM192AQ9GZU8 254 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 CYP4F11Q9HBI6 524 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 ADAMTS6Q9UKP5 1117 aa19.61■□□□□ 0.73
SCARF1-206ENST00000573852 A0A0A0MRY4 1105 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 DGKIO75912 1065 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 STAU1O95793 577 aaKnown RBP19.6■□□□□ 0.73
SCARF1-206ENST00000573852 GOT1P17174 413 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 DESP17661 470 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 PTPN9P43378 593 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 ASPHQ12797 758 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 PEX6Q13608 980 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 SOWAHAQ2M3V2 549 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 SFT2D3Q587I9 215 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 BSPRYQ5W0U4 402 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 LPCAT4Q643R3 524 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 OR6Y1Q8NGX8 325 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.6■□□□□ 0.73
SCARF1-206ENST00000573852 TRPM4Q8TD43 1214 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 TFB1MQ8WVM0 346 aaKnown RBP19.6■□□□□ 0.73
SCARF1-206ENST00000573852 CENPIQ92674 756 aaPredicted RBP19.6■□□□□ 0.73
SCARF1-206ENST00000573852 ATP2A3Q93084 1043 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 KIF12Q96FN5 646 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 SPATA13Q96N96 652 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 CEP41Q9BYV8 373 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 ZNF358Q9NW07 568 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 MORF4L1Q9UBU8 362 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 MCM3APO60318 1980 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 VTNP04004 478 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 MLNP12872 115 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 DALRD3Q5D0E6 543 aaKnown RBP19.6■□□□□ 0.73
SCARF1-206ENST00000573852 AP1ARQ63HQ0 302 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 PDPK2PQ6A1A2 396 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 LRRC8BQ6P9F7 803 aa19.6■□□□□ 0.73
SCARF1-206ENST00000573852 TTC39CQ8N584 583 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms