RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 E2F5Q15329 346 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 PTPRNQ16849 979 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 FAM124AQ86V42 546 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 FMR1NBQ8N0W7 255 aaPredicted RBP22.93■■□□□ 1.26
SNF8-216ENST00000573795 SCML4Q8N228 414 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 PNPLA1Q8N8W4 532 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 WFDC5Q8TCV5 224 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 ADAMTS14Q8WXS8 1223 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 TFAP2BQ92481 460 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 ZSWIM1Q9BR11 485 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 HESX1Q9UBX0 185 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 EIF2B4Q9UI10 523 aaKnown RBP22.93■■□□□ 1.26
SNF8-216ENST00000573795 PCOLCE2Q9UKZ9 415 aa22.93■■□□□ 1.26
SNF8-216ENST00000573795 FNDC3AQ9Y2H6 1198 aaKnown RBP22.93■■□□□ 1.26
SNF8-216ENST00000573795 TRIM49BA6NDI0 452 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 LATS1O95835 1130 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 ACADMP11310 421 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 VDRP11473 427 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 LRMPQ12912 555 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 ADGRF1Q5T601 910 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 ZNF658Q5TYW1 1059 aaPredicted RBP22.92■■□□□ 1.26
SNF8-216ENST00000573795 MSANTD2Q6P1R3 559 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 CHST9Q7L1S5 443 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 WFIKKN2Q8TEU8 576 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 RNF139Q8WU17 664 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 IPO9Q96P70 1041 aaKnown RBP22.92■■□□□ 1.26
SNF8-216ENST00000573795 C6orf106Q9H6K1 298 aaPredicted RBP22.92■■□□□ 1.26
SNF8-216ENST00000573795 GAREM1Q9H706 876 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 CNGB3Q9NQW8 809 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 ABCC13Q9NSE7 274 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 ABCB8Q9NUT2 735 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 CELSR3Q9NYQ7 3312 aa22.92■■□□□ 1.26
SNF8-216ENST00000573795 IGLV3-27P01718 113 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 ZNF883P0CG24 379 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 SETSIPP0DME0 302 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 HOXB3P14651 431 aaPredicted RBP22.91■■□□□ 1.26
SNF8-216ENST00000573795 ACSL1P33121 698 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 RDXP35241 583 aaKnown RBP22.91■■□□□ 1.26
SNF8-216ENST00000573795 ZNF445P59923 1031 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 FKBP3Q00688 224 aaKnown RBP22.91■■□□□ 1.26
SNF8-216ENST00000573795 LCLAT1Q6UWP7 414 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 GLRX5Q86SX6 157 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 SLCO6A1Q86UG4 719 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 SIX6OS1Q8N1H7 587 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 SPATA20Q8TB22 786 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 BAHD1Q8TBE0 780 aaPredicted RBP22.91■■□□□ 1.26
SNF8-216ENST00000573795 ERCC4Q92889 916 aaPredicted RBP22.91■■□□□ 1.26
SNF8-216ENST00000573795 TMA16Q96EY4 203 aaKnown RBP22.91■■□□□ 1.26
SNF8-216ENST00000573795 LHX5Q9H2C1 402 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 RMND1Q9NWS8 449 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 GGA2Q9UJY4 613 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 PCDHB9Q9Y5E1 797 aa22.91■■□□□ 1.26
SNF8-216ENST00000573795 ATRXP46100 2492 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 PABPC1P11940 636 aaKnown RBP22.9■■□□□ 1.26
SNF8-216ENST00000573795 LCP1P13796 627 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 YWHAEP62258 255 aaKnown RBP22.9■■□□□ 1.26
SNF8-216ENST00000573795 ARID5AQ03989 594 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 HLA-BQ31612 363 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 FNDC3BQ53EP0 1204 aaKnown RBP22.9■■□□□ 1.26
SNF8-216ENST00000573795 FAM133BQ5BKY9 247 aaKnown RBP22.9■■□□□ 1.26
SNF8-216ENST00000573795 PMF1Q6P1K2 205 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 SLC35F5Q8WV83 523 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 LMLNQ96KR4 655 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 TSG101Q99816 390 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 PCED1AQ9H1Q7 454 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 PRSS16Q9NQE7 514 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 ATP6V1DQ9Y5K8 247 aa22.9■■□□□ 1.26
SNF8-216ENST00000573795 CABIN1Q9Y6J0 2220 aa22.89■■□□□ 1.26
SNF8-216ENST00000573795 GOLGA6L7A0A1B0GV03 622 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 A0A1B0GVT2 93 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 RNF225M0QZC1 329 aaPredicted RBP22.89■■□□□ 1.25
SNF8-216ENST00000573795 PIK3R2O00459 728 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 CER1O95813 267 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 SLC6A4P31645 630 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 CD70P32970 193 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 MATKP42679 507 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 RGS7P49802 495 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 RPS14P62263 151 aaKnown RBP22.89■■□□□ 1.25
SNF8-216ENST00000573795 MBLAC2Q68D91 279 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 RFWD3Q6PCD5 774 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 DBX2Q6ZNG2 339 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 PROSER1Q86XN7 944 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 AHI1Q8N157 1196 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 ENGASEQ8NFI3 743 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 CLEC4CQ8WTT0 213 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 KAT5Q92993 513 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 GSDMAQ96QA5 445 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 TM7SF3Q9NS93 570 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 TOR4AQ9NXH8 423 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 ARMCX3Q9UH62 379 aaPredicted RBP22.89■■□□□ 1.25
SNF8-216ENST00000573795 KIAA1257Q9ULG3 409 aa22.89■■□□□ 1.25
SNF8-216ENST00000573795 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.89■■□□□ 1.25
SNF8-216ENST00000573795 TP53BP1Q12888 1972 aaPredicted RBP22.89■■□□□ 1.25
SNF8-216ENST00000573795 CALCAP01258 141 aa22.88■■□□□ 1.25
SNF8-216ENST00000573795 TBXAS1P24557 533 aaPredicted RBP22.88■■□□□ 1.25
SNF8-216ENST00000573795 FMO5P49326 533 aa22.88■■□□□ 1.25
SNF8-216ENST00000573795 CSNK1EP49674 416 aaKnown RBP22.88■■□□□ 1.25
SNF8-216ENST00000573795 RING1Q06587 406 aa22.88■■□□□ 1.25
SNF8-216ENST00000573795 PIK3R6Q5UE93 754 aa22.88■■□□□ 1.25
SNF8-216ENST00000573795 TMEM270Q6UE05 265 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms