RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ADAM32Q8TC27 787 aa18■□□□□ 0.47
SMG6-212ENST00000573153 DDI1Q8WTU0 396 aa18■□□□□ 0.47
SMG6-212ENST00000573153 MYO19Q96H55 970 aa18■□□□□ 0.47
SMG6-212ENST00000573153 SLC2A13Q96QE2 648 aa18■□□□□ 0.47
SMG6-212ENST00000573153 IRX2Q9BZI1 471 aaPredicted RBP18■□□□□ 0.47
SMG6-212ENST00000573153 NUCKS1Q9H1E3 243 aaKnown RBP18■□□□□ 0.47
SMG6-212ENST00000573153 TMEM245Q9H330 911 aa18■□□□□ 0.47
SMG6-212ENST00000573153 USP36Q9P275 1121 aaKnown RBP18■□□□□ 0.47
SMG6-212ENST00000573153 BCCIPQ9P287 314 aaKnown RBP eCLIP18■□□□□ 0.47
SMG6-212ENST00000573153 INTS6Q9UL03 887 aaKnown RBP18■□□□□ 0.47
SMG6-212ENST00000573153 TLR6Q9Y2C9 796 aa18■□□□□ 0.47
SMG6-212ENST00000573153 CDX4O14627 284 aaPredicted RBP17.99■□□□□ 0.47
SMG6-212ENST00000573153 MBD3O95983 291 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 ERBB2P04626 1255 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 CYBBP04839 570 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 CD70P32970 193 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 PTPN20Q4JDL3 420 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 AASDHQ4L235 1098 aaPredicted RBP17.99■□□□□ 0.47
SMG6-212ENST00000573153 SPDYCQ5MJ68 293 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 ARTNQ5T4W7 220 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 NUGGCQ68CJ6 796 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 OLFML1Q6UWY5 402 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 METTL3Q86U44 580 aaKnown RBP17.99■□□□□ 0.47
SMG6-212ENST00000573153 SLC47A2Q86VL8 602 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 DDX1Q92499 740 aaKnown RBP17.99■□□□□ 0.47
SMG6-212ENST00000573153 TRIM62Q9BVG3 475 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 LHX5Q9H2C1 402 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 ST7Q9NRC1 585 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 NFE2L3Q9Y4A8 694 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 FHOD1Q9Y613 1164 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 CEP192Q8TEP8 1941 aa17.99■□□□□ 0.47
SMG6-212ENST00000573153 NPC1O15118 1278 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 CDH5P33151 784 aaPredicted RBP17.98■□□□□ 0.47
SMG6-212ENST00000573153 DHPSP49366 369 aaPredicted RBP17.98■□□□□ 0.47
SMG6-212ENST00000573153 RPS24P62847 133 aaKnown RBP17.98■□□□□ 0.47
SMG6-212ENST00000573153 ARMCX6Q7L4S7 300 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 CYP2U1Q7Z449 544 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 PASD1Q8IV76 773 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 C1orf131Q8NDD1 294 aaKnown RBP17.98■□□□□ 0.47
SMG6-212ENST00000573153 GOLGA1Q92805 767 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 TMA16Q96EY4 203 aaKnown RBP17.98■□□□□ 0.47
SMG6-212ENST00000573153 SPACA7Q96KW9 195 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 SERPINB11Q96P15 392 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 PRMT1Q99873 361 aaKnown RBP17.98■□□□□ 0.47
SMG6-212ENST00000573153 EDEM2Q9BV94 578 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 GANQ9H2C0 597 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 POPDC2Q9HBU9 364 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 ABCB8Q9NUT2 735 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 EVLQ9UI08 416 aaPredicted RBP17.98■□□□□ 0.47
SMG6-212ENST00000573153 GGA2Q9UJY4 613 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 PILRBQ9UKJ0 227 aa17.98■□□□□ 0.47
SMG6-212ENST00000573153 ATXN2Q99700 1313 aaKnown RBP17.98■□□□□ 0.47
SMG6-212ENST00000573153 TRUB2O95900 331 aaKnown RBP17.97■□□□□ 0.47
SMG6-212ENST00000573153 IGLV3-19P01714 112 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 PABPC1P11940 636 aaKnown RBP17.97■□□□□ 0.47
SMG6-212ENST00000573153 ITPKAP23677 461 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 IRX4P78413 519 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 PTK2Q05397 1052 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 CAMK2GQ13555 558 aaPredicted RBP17.97■□□□□ 0.47
SMG6-212ENST00000573153 FSCBQ5H9T9 825 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 MS4A13Q5J8X5 152 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 KLHDC7AQ5VTJ3 777 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 C11orf57Q6ZUT1 292 aaPredicted RBP17.97■□□□□ 0.47
SMG6-212ENST00000573153 FAM183BPQ6ZVS7 135 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 LPCAT2Q7L5N7 544 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 UNC45BQ8IWX7 931 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 C12orf50Q8NA57 414 aaPredicted RBP17.97■□□□□ 0.47
SMG6-212ENST00000573153 CYB5D2Q8WUJ1 264 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 FAM149B1Q96BN6 582 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 HSD3B7Q9H2F3 369 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 PLCB1Q9NQ66 1216 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 ASNSD1Q9NWL6 643 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 CYP8B1Q9UNU6 501 aa17.97■□□□□ 0.47
SMG6-212ENST00000573153 KCNU1A8MYU2 1149 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 I6L893 689 aaPredicted RBP17.96■□□□□ 0.47
SMG6-212ENST00000573153 EPHB6O15197 1021 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 TBL1XO60907 577 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 HLA-EP13747 358 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 BPIFB4P59827 614 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 YWHAZP63104 245 aaKnown RBP17.96■□□□□ 0.47
SMG6-212ENST00000573153 LMAN2Q12907 356 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 DRAP1Q14919 205 aaPredicted RBP17.96■□□□□ 0.47
SMG6-212ENST00000573153 DCAF6Q58WW2 860 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 CHST9Q7L1S5 443 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 DEFB106AQ8N104 65 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 PGBD3Q8N328 593 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 WFIKKN2Q8TEU8 576 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 MRGPRX3Q96LB0 322 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 CIPCQ9C0C6 399 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 ANLNQ9NQW6 1124 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 ITM2CQ9NQX7 267 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 ANO10Q9NW15 660 aa17.96■□□□□ 0.47
SMG6-212ENST00000573153 ZNF217O75362 1048 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 GLI1P08151 1106 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 ADRB1P08588 477 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 USP8P40818 1118 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 SLC11A2P49281 568 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 KLK7P49862 253 aa17.95■□□□□ 0.46
SMG6-212ENST00000573153 ZC3H12AQ5D1E8 599 aaKnown RBP17.95■□□□□ 0.46
SMG6-212ENST00000573153 PPM1JQ5JR12 505 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms