RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 PNKPQ96T60 521 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 PCDHB18PQ96TA0 734 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 C11orf70Q9BRQ4 267 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 ARRDC1-AS1Q9H2J1 176 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 SMOC1Q9H4F8 434 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 ARHGEF4Q9NR80 690 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 SCML2Q9UQR0 700 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 INVSQ9Y283 1065 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
NDE1-206ENST00000572967 CCDC163A0A0D9SF12 145 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 TMCO5BA8MYB1 307 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 NEDD8-MDP1E9PL57 170 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 KRT86O43790 486 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 GDF9O60383 454 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 EPN2O95208 641 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 CALCAP01258 141 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 GLI1P08151 1106 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 GBP1P32455 592 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 EIF2DP41214 584 aaKnown RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 GABRB2P47870 512 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 RPL34P49207 117 aaKnown RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 PSEN1P49768 467 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 VAV2P52735 878 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 FOXK2Q01167 660 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 GAD2Q05329 585 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 ADIGQ0VDE8 80 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 SF3A2Q15428 464 aaKnown RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 AASDHQ4L235 1098 aaPredicted RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 C10orf120Q5SQS8 335 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 TPGS1Q6ZTW0 290 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 MON1BQ7L1V2 547 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 TADA2BQ86TJ2 420 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 MCOLN2Q8IZK6 566 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 ADGRG2Q8IZP9 1017 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 PHTF2Q8N3S3 785 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 KIAA1958Q8N8K9 716 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 MDGA1Q8NFP4 955 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 BHMTQ93088 406 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 OTUB2Q96DC9 234 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 KLF16Q9BXK1 252 aaPredicted RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 PARVAQ9NVD7 372 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 ASNSD1Q9NWL6 643 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 RASAL2Q9UJF2 1139 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 LSM7Q9UK45 103 aaKnown RBP12.34□□□□□ -0.43
NDE1-206ENST00000572967 MMP17Q9ULZ9 603 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 PCDHA13Q9Y5I0 950 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 CEP192Q8TEP8 1941 aa12.34□□□□□ -0.43
NDE1-206ENST00000572967 PRR5-ARHGAP8B1AHC4 643 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.33□□□□□ -0.44
NDE1-206ENST00000572967 E5RJQ4 531 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 HOXC11O43248 304 aaPredicted RBP12.33□□□□□ -0.44
NDE1-206ENST00000572967 HSF2BPO75031 334 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 LRP3O75074 770 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 TULP3O75386 442 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 ZBED1O96006 694 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
NDE1-206ENST00000572967 RARGP13631 454 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 HNRNPLP14866 589 aaKnown RBP eCLIP12.33□□□□□ -0.44
NDE1-206ENST00000572967 MSNP26038 577 aaKnown RBP12.33□□□□□ -0.44
NDE1-206ENST00000572967 ATP5C1P36542 298 aaKnown RBP12.33□□□□□ -0.44
NDE1-206ENST00000572967 MPLP40238 635 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 RGS7P49802 495 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 TKTL1P51854 596 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 ATXN1P54253 815 aaKnown RBP12.33□□□□□ -0.44
NDE1-206ENST00000572967 ARHGAP8P85298 464 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 CSRP2Q16527 193 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 PTPN20Q4JDL3 420 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 RAB41Q5JT25 222 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 EFHC1Q5JVL4 640 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 EMC10Q5UCC4 262 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 BTBD8Q5XKL5 378 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 PMF1Q6P1K2 205 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 DCUN1D2Q6PH85 259 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 TMEM92Q6UXU6 159 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 MIB1Q86YT6 1006 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 ETFBKMTQ8IXQ9 262 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 IL17RCQ8NAC3 791 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 NETO1Q8TDF5 533 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 RFFLQ8WZ73 363 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 ERLEC1Q96DZ1 483 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 CPXM1Q96SM3 734 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 SELENOOQ9BVL4 669 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 SPHK2Q9NRA0 654 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 DNAJC17Q9NVM6 304 aaKnown RBP12.33□□□□□ -0.44
NDE1-206ENST00000572967 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.33□□□□□ -0.44
NDE1-206ENST00000572967 CNOT8Q9UFF9 292 aaKnown RBP12.33□□□□□ -0.44
NDE1-206ENST00000572967 NENFQ9UMX5 172 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 ADGRG1Q9Y653 693 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 DMXL1Q9Y485 3027 aa12.33□□□□□ -0.44
NDE1-206ENST00000572967 A0A0A6YYK5 440 aaPredicted RBP12.32□□□□□ -0.44
NDE1-206ENST00000572967 TCRBV21S2A2A0A5A6 115 aa12.32□□□□□ -0.44
NDE1-206ENST00000572967 DCDC2BA2VCK2 349 aa12.32□□□□□ -0.44
NDE1-206ENST00000572967 BTNL10A8MVZ5 291 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms