RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CRACR2AQ9BSW2 395 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 SLC4A5Q9BY07 1137 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 UBE2TQ9NPD8 197 aaPredicted RBP18.86■□□□□ 0.61
CHD3-214ENST00000572579 ABCB8Q9NUT2 735 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 KIAA1468Q9P260 1216 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 TJP2Q9UDY2 1190 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 XPO7Q9UIA9 1087 aaKnown RBP18.86■□□□□ 0.61
CHD3-214ENST00000572579 ANGPTL2Q9UKU9 493 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHD3-214ENST00000572579 SLCO1B1Q9Y6L6 691 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 NPC1O15118 1278 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 LATS1O95835 1130 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 GNA14O95837 355 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 SLC9A1P19634 815 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 SPINK2P20155 84 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 CD70P32970 193 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 SEMA3BQ13214 749 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 EIF4HQ15056 248 aaKnown RBP18.85■□□□□ 0.61
CHD3-214ENST00000572579 WDTC1Q8N5D0 677 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 ADAM32Q8TC27 787 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 SLC39A13Q96H72 371 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 PRICKLE1Q96MT3 831 aaPredicted RBP18.85■□□□□ 0.61
CHD3-214ENST00000572579 AJAP1Q9UKB5 411 aaPredicted RBP18.85■□□□□ 0.61
CHD3-214ENST00000572579 USP24Q9UPU5 2620 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 CFAP47Q6ZTR5 3102 aa18.85■□□□□ 0.61
CHD3-214ENST00000572579 ZBTB24O43167 697 aaPredicted RBP18.84■□□□□ 0.61
CHD3-214ENST00000572579 PAPSS1O43252 624 aaPredicted RBP18.84■□□□□ 0.61
CHD3-214ENST00000572579 ACSL4O60488 711 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 IGLV3-19P01714 112 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 EPHX1P07099 455 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 CEACAM1P13688 526 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 PI4KAP42356 2102 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 TBX4P57082 545 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 FAM193AP78312 1265 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 PITX1P78337 314 aaPredicted RBP18.84■□□□□ 0.61
CHD3-214ENST00000572579 CETN1Q12798 172 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 CAMK2GQ13555 558 aaPredicted RBP18.84■□□□□ 0.61
CHD3-214ENST00000572579 STILQ15468 1287 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 TAF5Q15542 800 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 CHST9Q7L1S5 443 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 CEP76Q8TAP6 659 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 UCMAQ8WVF2 138 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 ZNF606Q8WXB4 792 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 DNASE2BQ8WZ79 361 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 SIPA1Q96FS4 1042 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 GTPBP2Q9BX10 602 aaKnown RBP18.84■□□□□ 0.61
CHD3-214ENST00000572579 GPR174Q9BXC1 333 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 MTG2Q9H4K7 406 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 GGA2Q9UJY4 613 aa18.84■□□□□ 0.61
CHD3-214ENST00000572579 INTS6Q9UL03 887 aaKnown RBP18.84■□□□□ 0.61
CHD3-214ENST00000572579 ARHGAP33O14559 1287 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 SYNCRIPO60506 623 aaKnown RBP18.83■□□□□ 0.6
CHD3-214ENST00000572579 TBL1XO60907 577 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 GJB3O75712 270 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 FBXO21O94952 628 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 PABPC1P11940 636 aaKnown RBP18.83■□□□□ 0.6
CHD3-214ENST00000572579 KRT5P13647 590 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 CD59P13987 128 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 RPS24P62847 133 aaKnown RBP18.83■□□□□ 0.6
CHD3-214ENST00000572579 BNC1Q01954 994 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 RING1Q06587 406 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 ZNF252P-AS1Q0IIN9 211 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 EIF4EBP2Q13542 120 aaPredicted RBP18.83■□□□□ 0.6
CHD3-214ENST00000572579 STARD3Q14849 445 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 FSCBQ5H9T9 825 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 MBLAC2Q68D91 279 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 DPY19L2P1Q6NXN4 242 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 TRIM65Q6PJ69 517 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 SERPINA13PQ6UXR4 307 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 TMEM110Q86TL2 294 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 TAC4Q86UU9 113 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 CACUL1Q86Y37 369 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 C1orf216Q8TAB5 229 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 AZIN2Q96A70 460 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 MYO19Q96H55 970 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 NUCKS1Q9H1E3 243 aaKnown RBP18.83■□□□□ 0.6
CHD3-214ENST00000572579 RWDD2AQ9UIY3 292 aa18.83■□□□□ 0.6
CHD3-214ENST00000572579 PCDH15Q96QU1 1955 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 PCNX2A6NKB5 2137 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 UPK3BL1B0FP48 263 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 UPK3BL2E5RIL1 263 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 NDUFS2O75306 463 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 LETM1O95202 739 aaPredicted RBP18.82■□□□□ 0.6
CHD3-214ENST00000572579 DPP6P42658 865 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 GFPT1Q06210 699 aaPredicted RBP18.82■□□□□ 0.6
CHD3-214ENST00000572579 MPP7Q5T2T1 576 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 MMS22LQ6ZRQ5 1243 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 MINDY1Q8N5J2 469 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 OR2T3Q8NH03 318 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 STK32AQ8WU08 396 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 PRSS16Q9NQE7 514 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 WDFY3Q8IZQ1 3526 aa18.82■□□□□ 0.6
CHD3-214ENST00000572579 SPAARA0A1B0GVQ0 90 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 METTL12A8MUP2 240 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 E5RJQ4 531 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 IGLV3-25P01717 112 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 DLDP09622 509 aaKnown RBP18.81■□□□□ 0.6
CHD3-214ENST00000572579 ZNF445P59923 1031 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 NUGGCQ68CJ6 796 aa18.81■□□□□ 0.6
CHD3-214ENST00000572579 UNC45BQ8IWX7 931 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms