RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 GOLGA6CA6NDK9 693 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 HMGB1P1B2RPK0 211 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 VNN2O95498 520 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 GOLGA6DP0CG33 693 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 CHKAP35790 457 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 GABPB1Q06547 395 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 ZNF844Q08AG5 666 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 SLC10A2Q12908 348 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 SLC29A2Q14542 456 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 FAM117BQ6P1L5 589 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 TTC9BQ8N6N2 239 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 CPT1BQ92523 772 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 PRCCQ92733 491 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 C1orf74Q96LT6 269 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 VN1R3Q9BXE9 311 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 EPB41L4BQ9H329 900 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 C10orf88Q9H8K7 445 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 TMBIM4Q9HC24 238 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 TMPRSS4Q9NRS4 437 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 GOLGA6AQ9NYA3 693 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 DONSONQ9NYP3 566 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 MRPL42Q9Y6G3 142 aaKnown RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 KIAA0100Q14667 2235 aaKnown RBP20.06■□□□□ 0.8
RPAIN-210ENST00000571613 SLC38A8A6NNN8 435 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 FGF10O15520 208 aaPredicted RBP20.06■□□□□ 0.8
RPAIN-210ENST00000571613 MTSS1O43312 755 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 ABLIM3O94929 683 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 FGBP02675 491 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 ACRP10323 421 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 PLXNA3P51805 1871 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 ARL4CP56559 192 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 USP46P62068 366 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 BASP1P80723 227 aaKnown RBP20.06■□□□□ 0.8
RPAIN-210ENST00000571613 TAF10Q12962 218 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 LZTR1Q8N653 840 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 HTR3CQ8WXA8 447 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 CLSTN3Q9BQT9 956 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 UBE2OQ9C0C9 1292 aaKnown RBP20.06■□□□□ 0.8
RPAIN-210ENST00000571613 CATSPERBQ9H7T0 1116 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 ANLNQ9NQW6 1124 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 ETNK2Q9NVF9 386 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.06■□□□□ 0.8
RPAIN-210ENST00000571613 SFMBT1Q9UHJ3 866 aa20.06■□□□□ 0.8
RPAIN-210ENST00000571613 COL4A6Q14031 1691 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 KCNU1A8MYU2 1149 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 MFSD11O43934 449 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 LRIG2O94898 1065 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 APOEP02649 317 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 ZDHHC11BP0C7U3 371 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 EPHB2P29323 1055 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 MAGEA4P43358 317 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 HIF1AQ16665 826 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 AGBL2Q5U5Z8 902 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 CCDC77Q9BR77 488 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 CRISPLD1Q9H336 500 aa20.05■□□□□ 0.8
RPAIN-210ENST00000571613 FAM72CH0Y354 149 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 I6L893 689 aaPredicted RBP20.04■□□□□ 0.8
RPAIN-210ENST00000571613 PAGE1O75459 146 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 ABHD2P08910 425 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 CSH1P0DML2 217 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 CSH2P0DML3 217 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 TBX4P57082 545 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 ZNF33AQ06730 810 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 CBLBQ13191 982 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 RAB33AQ14088 237 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 PRKD1Q15139 912 aaPredicted RBP20.04■□□□□ 0.8
RPAIN-210ENST00000571613 KRT71Q3SY84 523 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 C6orf118Q5T5N4 469 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 FAM72AQ5TYM5 149 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 FAM72DQ6L9T8 149 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 OTOP2Q7RTS6 562 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 UBE2Q1Q7Z7E8 422 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 FAM72BQ86X60 149 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 PDIK1LQ8N165 341 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 VPS52Q8N1B4 723 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 ATP6V0D2Q8N8Y2 350 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 FAM76AQ8TAV0 307 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 SLC39A13Q96H72 371 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 ATP6V1G3Q96LB4 118 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 OSER1Q9NX31 292 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 FNIP2Q9P278 1114 aa20.04■□□□□ 0.8
RPAIN-210ENST00000571613 C2CD2LO14523 706 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 ALOX15BO15296 676 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 OPHN1O60890 802 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 HOXC13P31276 330 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 FDFT1P37268 417 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 MAGEA6P43360 314 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 COG7P83436 770 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 FPGSQ05932 587 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 TRIP4Q15650 581 aaPredicted RBP20.03■□□□□ 0.8
RPAIN-210ENST00000571613 PSRC1Q6PGN9 363 aaPredicted RBP20.03■□□□□ 0.8
RPAIN-210ENST00000571613 EXOC4Q96A65 974 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 TBC1D31Q96DN5 1066 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 STMN4Q9H169 189 aaPredicted RBP20.03■□□□□ 0.8
RPAIN-210ENST00000571613 SAYSD1Q9NPB0 183 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 RAB6BQ9NRW1 208 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 MRPL17Q9NRX2 175 aaKnown RBP20.03■□□□□ 0.8
RPAIN-210ENST00000571613 A0A0A0MRY4 1105 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 ZBBXA8MT70 800 aa20.03■□□□□ 0.8
RPAIN-210ENST00000571613 ADAM12O43184 909 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms