RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 OXR1Q8N573 874 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 ZNF248Q8NDW4 579 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 GANCQ8TET4 914 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 RFFLQ8WZ73 363 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 TAF4BQ92750 862 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 HPS3Q969F9 1004 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 CYFIP2Q96F07 1278 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 ORAI3Q9BRQ5 295 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 GZF1Q9H116 711 aaPredicted RBP11.86□□□□□ -0.51
CHMP6-202ENST00000571457 SDCBP2Q9H190 292 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 PRSS16Q9NQE7 514 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 TPX2Q9ULW0 747 aaKnown RBP11.86□□□□□ -0.51
CHMP6-202ENST00000571457 CLEC4EQ9ULY5 219 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 CLCA2Q9UQC9 943 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 CLIC4Q9Y696 253 aa11.86□□□□□ -0.51
CHMP6-202ENST00000571457 LRRC72A6NJI9 287 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 B8ZZF3 427 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 ARHGAP6O43182 974 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 RNASEH1O60930 286 aaKnown RBP11.85□□□□□ -0.51
CHMP6-202ENST00000571457 DLDP09622 509 aaKnown RBP11.85□□□□□ -0.51
CHMP6-202ENST00000571457 CKMT2P17540 419 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 CD38P28907 300 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 EPHA8P29322 1005 aaPredicted RBP11.85□□□□□ -0.51
CHMP6-202ENST00000571457 PCBP4P57723 403 aaKnown RBP11.85□□□□□ -0.51
CHMP6-202ENST00000571457 ASIC1P78348 528 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 CLDN10P78369 228 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 PKDCCQ504Y2 493 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 SLC45A4Q5BKX6 768 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 PRAMEF14Q5SWL7 426 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 ERICH1Q86X53 443 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 C12orf56Q8IXR9 622 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 FAM217AQ8IXS0 508 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 AHI1Q8N157 1196 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 PDILTQ8N807 584 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 ZNF366Q8N895 744 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 GOLGA5Q8TBA6 731 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 CYB5D2Q8WUJ1 264 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 PLD4Q96BZ4 506 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 SLC6A18Q96N87 628 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 CUEDC2Q9H467 287 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 AASDHPPTQ9NRN7 309 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 MARCH2Q9P0N8 246 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
CHMP6-202ENST00000571457 FLNCQ14315 2725 aa11.85□□□□□ -0.51
CHMP6-202ENST00000571457 TLN1Q9Y490 2541 aaKnown RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 UBR5O95071 2799 aaPredicted RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 SLC12A8A0AV02 714 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 FAM47DPA6NHR8 397 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 KIF20AO95235 890 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 C4BPAP04003 597 aaKnown RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 HOXD9P28356 352 aaPredicted RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 HLA-FP30511 346 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 HARS2P49590 506 aaKnown RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 CASP4P49662 377 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 E2F1Q01094 437 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 SHBQ15464 509 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 CHST9Q7L1S5 443 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 NELFCDQ8IXH7 590 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 LSMEM2Q8N112 164 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 DCBLD1Q8N8Z6 715 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 ZNF557Q8N988 423 aaPredicted RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 PARD3BQ8TEW8 1205 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 ZNF578Q96N58 590 aaPredicted RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 ARID3AQ99856 593 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 NT5C1AQ9BXI3 368 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 DUSP16Q9BY84 665 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 RSPH9Q9H1X1 276 aaPredicted RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 PABPC3Q9H361 631 aaKnown RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 KBTBD4Q9NVX7 518 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 FBXL12Q9NXK8 326 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 HMGXB4Q9UGU5 601 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 ADAMTS1Q9UHI8 967 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 GGA2Q9UJY4 613 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 USP3Q9Y6I4 520 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 TP53BP1Q12888 1972 aaPredicted RBP11.84□□□□□ -0.51
CHMP6-202ENST00000571457 LRRK2Q5S007 2527 aa11.84□□□□□ -0.51
CHMP6-202ENST00000571457 A0A087X0B3 334 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
CHMP6-202ENST00000571457 VNN1O95497 513 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 ASS1P00966 412 aaKnown RBP11.83□□□□□ -0.52
CHMP6-202ENST00000571457 PABPC1P11940 636 aaKnown RBP11.83□□□□□ -0.52
CHMP6-202ENST00000571457 C6P13671 934 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 POLR2EP19388 210 aaKnown RBP11.83□□□□□ -0.52
CHMP6-202ENST00000571457 PDCP20941 246 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 RXRGP48443 463 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 CCR5P51681 352 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 GALCP54803 685 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 INCA1Q0VD86 236 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 CNNM4Q6P4Q7 775 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 NCEH1Q6PIU2 408 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 ADIPOR2Q86V24 386 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHMP6-202ENST00000571457 FAM181AQ8N9Y4 354 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 OR2T34Q8NGX1 318 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 TMA16Q96EY4 203 aaKnown RBP11.83□□□□□ -0.52
CHMP6-202ENST00000571457 IMPG2Q9BZV3 1241 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 ERVMER34-1Q9H9K5 563 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 ABCB8Q9NUT2 735 aa11.83□□□□□ -0.52
CHMP6-202ENST00000571457 MORC2Q9Y6X9 1032 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms