RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TRIM14Q14142 442 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 ZNF77Q15935 545 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 DUOXA1Q1HG43 343 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 EML3Q32P44 896 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 C2CD6Q53TS8 623 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 SPDYCQ5MJ68 293 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 RAB44Q7Z6P3 723 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-205ENST00000571028 SCD5Q86SK9 330 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 ZNF677Q86XU0 584 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 FMNL3Q8IVF7 1028 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 SLC30A5Q8TAD4 765 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 IPO4Q8TEX9 1081 aaKnown RBP13.9□□□□□ -0.18
CCDC40-205ENST00000571028 HMGB4Q8WW32 186 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 EDEM1Q92611 657 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 IQCDQ96DY2 449 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 PPP1R13BQ96KQ4 1090 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 HSFY1Q96LI6 401 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 SLC22A12Q96S37 553 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 CPXM1Q96SM3 734 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 SLC4A5Q9BY07 1137 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 LHX5Q9H2C1 402 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 CCSER2Q9H7U1 834 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 OSER1Q9NX31 292 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 SMPD4Q9NXE4 827 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 IL37Q9NZH6 218 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 AIPL1Q9NZN9 384 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 MBD1Q9UIS9 605 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-205ENST00000571028 MYH10P35580 1976 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 SETXQ7Z333 2677 aaKnown RBP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 FREM2Q5SZK8 3169 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 GOLGA6L3A6NEY3 463 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 TMCO5BA8MYB1 307 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 MDM4O15151 490 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 TBX18O95935 607 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 ERBB2P04626 1255 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 MBL2P11226 248 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 RALAP11233 206 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 RARGP13631 454 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 ITPKAP23677 461 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 PPP3CCP48454 512 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 YWHAGP61981 247 aaKnown RBP eCLIP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 MRPS21P82921 87 aaKnown RBP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 USP4Q13107 963 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 TSR1Q2NL82 804 aaKnown RBP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 PTPN20Q4JDL3 420 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 EOGTQ5NDL2 527 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 BTBD8Q5XKL5 378 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 RSRC2Q7L4I2 434 aaKnown RBP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 ZNF571Q7Z3V5 609 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 ERICH1Q86X53 443 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 MINDY1Q8N5J2 469 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 ALLCQ8N6M5 410 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 OLIG1Q8TAK6 271 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 SH3RF2Q8TEC5 729 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 HNRNPLLQ8WVV9 542 aaKnown RBP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 FAM149B1Q96BN6 582 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 MRFAP1L1Q96HT8 127 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 LRIG1Q96JA1 1093 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 NUCKS1Q9H1E3 243 aaKnown RBP13.89□□□□□ -0.19
CCDC40-205ENST00000571028 FSCN3Q9NQT6 498 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 PILRBQ9UKJ0 227 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 USP3Q9Y6I4 520 aa13.89□□□□□ -0.19
CCDC40-205ENST00000571028 YJEFN3A6XGL0 299 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 AKR1B15C9JRZ8 316 aaPredicted RBP13.88□□□□□ -0.19
CCDC40-205ENST00000571028 E7ENQ6 273 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 GOLGA8SH3BPF8 625 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 K7EQS6 105 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 COCHO43405 550 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 TLR5O60602 858 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 GRAP2O75791 330 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 KLF8O95600 359 aaPredicted RBP13.88□□□□□ -0.19
CCDC40-205ENST00000571028 SYPP08247 313 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 PLEKP08567 350 aaPredicted RBP13.88□□□□□ -0.19
CCDC40-205ENST00000571028 SERPINF2P08697 491 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 IRF1P10914 325 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 DAOAP59103 153 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 NOMO3P69849 1222 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 FAM193AP78312 1265 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
CCDC40-205ENST00000571028 TRIP6Q15654 476 aaKnown RBP13.88□□□□□ -0.19
CCDC40-205ENST00000571028 MEA1Q16626 185 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 C10orf120Q5SQS8 335 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 BSPRYQ5W0U4 402 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 SMYD5Q6GMV2 418 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 MMS22LQ6ZRQ5 1243 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 DNAAF5Q86Y56 855 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 MIB1Q86YT6 1006 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 ARHGAP18Q8N392 663 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 TXNDC5Q8NBS9 432 aaKnown RBP13.88□□□□□ -0.19
CCDC40-205ENST00000571028 STK32AQ8WU08 396 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 OVCA2Q8WZ82 227 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 GOLGA1Q92805 767 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 C11orf70Q9BRQ4 267 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 RNF38Q9H0F5 515 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 CNGB3Q9NQW8 809 aa13.88□□□□□ -0.19
CCDC40-205ENST00000571028 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
CCDC40-205ENST00000571028 RASAL2Q9UJF2 1139 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms