RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 KREMEN1Q96MU8 473 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 NT5C1BQ96P26 610 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 WRNIP1Q96S55 665 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 ZCCHC2Q9C0B9 1178 aaKnown RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 TLE6Q9H808 572 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 ALG6Q9Y672 507 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 DLX3O60479 287 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 SGPL1O95470 568 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 ADH1BP00325 375 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 MYBL1P10243 752 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 CHRNB2P17787 502 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 IFI35P80217 286 aaPredicted RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 TNFAIP2Q03169 654 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 DCAF12L1Q5VU92 463 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 DUPD1Q68J44 220 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 CGB2Q6NT52 195 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 TRMT1LQ7Z2T5 733 aaKnown RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 ARHGAP18Q8N392 663 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 ANKRD52Q8NB46 1076 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 FAM13CQ8NE31 585 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 BTN2A2Q8WVV5 523 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 BSNDQ8WZ55 320 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 KAT5Q92993 513 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 TEX13BQ9BXU2 312 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 ACAD9Q9H845 621 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 JPH1Q9HDC5 661 aaPredicted RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 TXLNGQ9NUQ3 528 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 CIDEBQ9UHD4 219 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 AMACRQ9UHK6 382 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 SCOCQ9UIL1 159 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 KIAA1217Q5T5P2 1943 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 LMNAP02545 664 aaKnown RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 HMGCS2P54868 508 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 PTENP60484 403 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 CYP24A1Q07973 514 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 TMEM132BQ14DG7 1078 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 ZNF568Q3ZCX4 644 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 MAP1SQ66K74 1059 aaPredicted RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 SLC39A4Q6P5W5 647 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 CATSPERGQ6ZRH7 1159 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 LAPTM4BQ86VI4 370 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 PEX5LQ8IYB4 626 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 NRSN1Q8IZ57 195 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 SLC7A5P1Q8MH63 180 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 GPD1LQ8N335 351 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 UBL4BQ8N7F7 174 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 ATP11CQ8NB49 1132 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 FBXL13Q8NEE6 735 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 JADE3Q92613 823 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 SEMA4DQ92854 862 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 CCDC127Q96BQ5 260 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 NSUN5Q96P11 429 aaKnown RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 PCDHB18PQ96TA0 734 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 STMN4Q9H169 189 aaPredicted RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 TMEM39AQ9NV64 488 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 SLC9A2Q9UBY0 812 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 UTP11Q9Y3A2 253 aaKnown RBP8.32□□□□□ -1.08
TCF4-246ENST00000570287 SPO11Q9Y5K1 396 aa8.32□□□□□ -1.08
TCF4-246ENST00000570287 A0A096LPE4 126 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 A0A1W2PPZ6 126 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 EIF4E1BA6NMX2 242 aaKnown RBP8.31□□□□□ -1.08
TCF4-246ENST00000570287 SPATA31C2B4DYI2 1134 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 ARHGAP33O14559 1287 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 CYP26A1O43174 497 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 ARIH2O95376 493 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 OSMP13725 252 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 RAC2P15153 192 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 PMS2P54278 862 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 ABHD15Q6UXT9 468 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 NAT8LQ8N9F0 302 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 POMGNT1Q8WZA1 660 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 C18orf8Q96DM3 657 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 SELENOSQ9BQE4 189 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 CYP26B1Q9NR63 512 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.31□□□□□ -1.08
TCF4-246ENST00000570287 RAB20Q9NX57 234 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 DDX43Q9NXZ2 648 aaKnown RBP8.31□□□□□ -1.08
TCF4-246ENST00000570287 GJD2Q9UKL4 321 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 MYPNQ86TC9 1320 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 SYNGAP1Q96PV0 1343 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 RGS16O15492 202 aaPredicted RBP8.31□□□□□ -1.08
TCF4-246ENST00000570287 TTI1O43156 1089 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 ZC3H11AO75152 810 aaKnown RBP eCLIP8.31□□□□□ -1.08
TCF4-246ENST00000570287 ZBTB7AO95365 584 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 GGPS1O95749 300 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 POTEJP0CG39 1038 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 POLE2P56282 527 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 ACTR2P61160 394 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 FMO1Q01740 532 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 CDR2Q01850 454 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 LSAMPQ13449 338 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 GSTA3Q16772 222 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 XKR3Q5GH77 459 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 FAM209BQ5JX69 171 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 BROXQ5VW32 411 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 SMYD1Q8NB12 490 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 STKLD1Q8NE28 680 aa8.31□□□□□ -1.08
TCF4-246ENST00000570287 SP7Q8TDD2 431 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms