RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TIGD6Q17RP2 521 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 PHF19Q5T6S3 580 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 USP17L6PQ6QN14 398 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 SHC4Q6S5L8 630 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 SASS6Q6UVJ0 657 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 C4orf50Q6ZRC1 276 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 NIPA1Q7RTP0 329 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 CLEC14AQ86T13 490 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 GATAD2AQ86YP4 633 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 YAF2Q8IY57 180 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 CEP57L1Q8IYX8 460 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 C4orf32Q8N8J7 132 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 IQUBQ8NA54 791 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 CNNM3Q8NE01 707 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 CHST13Q8NET6 341 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 REPS2Q8NFH8 660 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 SPPL3Q8TCT6 385 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 IPO4Q8TEX9 1081 aaKnown RBP7.68□□□□□ -1.18
CNOT1-222ENST00000570139 CRYGNQ8WXF5 182 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 OPTNQ96CV9 577 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 EID2BQ96D98 161 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 FAM20AQ96MK3 541 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 SDF4Q9BRK5 362 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 CCSER1Q9C0I3 900 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 TSPY26PQ9H489 355 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 GOLPH3LQ9H4A5 285 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 ACAD9Q9H845 621 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 GBA2Q9HCG7 927 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-222ENST00000570139 UBN1Q9NPG3 1134 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 SLAMF7Q9NQ25 335 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 PAK6Q9NQU5 681 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-222ENST00000570139 FBXO28Q9NVF7 368 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 IFT80Q9P2H3 777 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-222ENST00000570139 DDX25Q9UHL0 483 aaKnown RBP7.68□□□□□ -1.18
CNOT1-222ENST00000570139 PFASO15067 1338 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 KDM3AQ9Y4C1 1321 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 KRTAP4-8A0A0G2JLE6 195 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 FSD2A1L4K1 749 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 B4DLN1 442 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 MYO1CO00159 1063 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 NRP1O14786 923 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 DYRK3O43781 588 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 INMTO95050 263 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 SLC25A27O95847 323 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 CETPP11597 493 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 ALAS1P13196 640 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 CAPN3P20807 821 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 UBA7P41226 1012 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 AFMP43652 599 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 PAPOLAP51003 745 aaKnown RBP7.67□□□□□ -1.18
CNOT1-222ENST00000570139 STAT5BP51692 787 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 NOMO3P69849 1222 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 EFR3AQ14156 821 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 RSPO4Q2I0M5 234 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-222ENST00000570139 HAUS3Q68CZ6 603 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 SNRNP48Q6IEG0 339 aaKnown RBP7.67□□□□□ -1.18
CNOT1-222ENST00000570139 BORAQ6PGQ7 559 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 ZNF572Q7Z3I7 529 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-222ENST00000570139 SUGP1Q8IWZ8 645 aaKnown RBP7.67□□□□□ -1.18
CNOT1-222ENST00000570139 MPP5Q8N3R9 675 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 AOPEPQ8N6M6 819 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 DCBLD1Q8N8Z6 715 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 TRIML1Q8N9V2 468 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 ERMNQ8TAM6 284 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 STT3BQ8TCJ2 826 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 ANP32BQ92688 251 aaKnown RBP7.67□□□□□ -1.18
CNOT1-222ENST00000570139 LPPQ93052 612 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 ZBTB10Q96DT7 871 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 SNX27Q96L92 541 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 MTMR9Q96QG7 549 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 GDF15Q99988 308 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 KATNAL1Q9BW62 490 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 PACSIN1Q9BY11 444 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 NAT10Q9H0A0 1025 aaKnown RBP7.67□□□□□ -1.18
CNOT1-222ENST00000570139 NT5C3AQ9H0P0 336 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 BRD9Q9H8M2 597 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 ZCCHC17Q9NP64 241 aaKnown RBP7.67□□□□□ -1.18
CNOT1-222ENST00000570139 KIF17Q9P2E2 1029 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 CDC42EP3Q9UKI2 254 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 ACTL7AQ9Y615 435 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 LOXHD1Q8IVV2 1947 aa7.67□□□□□ -1.18
CNOT1-222ENST00000570139 PRSS47A8MTI9 375 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 MTSS1O43312 755 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 SMC2O95347 1197 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 NDST3O95803 873 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 KNG1P01042 644 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 HMGCRP04035 888 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 ITGA2BP08514 1039 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 TXNP10599 105 aaKnown RBP7.66□□□□□ -1.18
CNOT1-222ENST00000570139 RARBP10826 455 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 MUTP22033 750 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 KCNQ1P51787 676 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 COPAP53621 1224 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 CTBP1Q13363 440 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 ADAM9Q13443 819 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 STX1AQ16623 288 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 RNF207Q6ZRF8 634 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 ANKRD23Q86SG2 305 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 KRT73Q86Y46 540 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms