RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 VAV2P52735 878 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 RBM5P52756 815 aaKnown RBP eCLIP4.16□□□□□ -1.74
UBR1-211ENST00000569971 CHRNDQ07001 517 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 MTAPQ13126 283 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 PDCLQ13371 301 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 ACOX1Q15067 660 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 SMAD1Q15797 465 aaKnown RBP4.16□□□□□ -1.74
UBR1-211ENST00000569971 GALNTL6Q49A17 601 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 RABL3Q5HYI8 236 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 IGFL4Q6B9Z1 124 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 SP5Q6BEB4 398 aaPredicted RBP4.16□□□□□ -1.74
UBR1-211ENST00000569971 MSANTD2Q6P1R3 559 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 PIK3AP1Q6ZUJ8 805 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 TRABD2AQ86V40 505 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 CPT1BQ92523 772 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 HDAC2Q92769 488 aaKnown RBP4.16□□□□□ -1.74
UBR1-211ENST00000569971 CFAP53Q96M91 514 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 VN1R3Q9BXE9 311 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 ZCWPW1Q9H0M4 648 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 ABHD16BQ9H3Z7 469 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 INTS13Q9NVM9 706 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 NDUFAF4Q9P032 175 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 DERAQ9Y315 318 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 RRP7AQ9Y3A4 280 aaKnown RBP4.16□□□□□ -1.74
UBR1-211ENST00000569971 SCINQ9Y6U3 715 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 PIK3C2BO00750 1634 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 EVC2Q86UK5 1308 aa4.16□□□□□ -1.74
UBR1-211ENST00000569971 RICTORQ6R327 1708 aa4.15□□□□□ -1.74
UBR1-211ENST00000569971 USP32Q8NFA0 1604 aa4.15□□□□□ -1.74
UBR1-211ENST00000569971 A1L4Q6 167 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 MARCH11A6NNE9 402 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 PRSS47A8MTI9 375 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 B4E171 279 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 STX16-NPEPL1H3BU86 382 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 STX16O14662 325 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 FAM20BO75063 409 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 WDR47O94967 919 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 CNPP09543 421 aaKnown RBP4.15□□□□□ -1.75
UBR1-211ENST00000569971 PPP3CBP16298 524 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 DRD1P21728 446 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 TSPAN7P41732 249 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 GSTM5P46439 218 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 MTHFSP49914 203 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 ATXN1P54253 815 aaKnown RBP4.15□□□□□ -1.75
UBR1-211ENST00000569971 NANOS3P60323 173 aaKnown RBP4.15□□□□□ -1.75
UBR1-211ENST00000569971 SF3A3Q12874 501 aaKnown RBP eCLIP4.15□□□□□ -1.75
UBR1-211ENST00000569971 ZNF569Q5MCW4 686 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 MAP3K21Q5TCX8 1036 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 BBS12Q6ZW61 710 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 DTX2Q86UW9 622 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 CAND1Q86VP6 1230 aaKnown RBP4.15□□□□□ -1.75
UBR1-211ENST00000569971 LDLRAD3Q86YD5 345 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 SUPT20HQ8NEM7 779 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 IL17DQ8TAD2 202 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 EXOC6Q8TAG9 804 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 SLC22A17Q8WUG5 538 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 LPIN2Q92539 896 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 GLG1Q92896 1179 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 GPR63Q9BZJ6 419 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 CCDC134Q9H6E4 229 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 ALG13Q9NP73 1137 aaKnown RBP4.15□□□□□ -1.75
UBR1-211ENST00000569971 TMEM74BQ9NUR3 256 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 IRAK4Q9NWZ3 460 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 STEAP1Q9UHE8 339 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 DNAJC16Q9Y2G8 782 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 CGNL1Q0VF96 1302 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 ITIH6Q6UXX5 1313 aa4.15□□□□□ -1.75
UBR1-211ENST00000569971 POLR3AO14802 1390 aaPredicted RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 NSD2O96028 1365 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 NINLQ9Y2I6 1382 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 ADGRB1O14514 1584 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 ZFYVE9O95405 1425 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 NSD3Q9BZ95 1437 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 GAGE12BA1L429 117 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 GAGE12HA6NDE8 117 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 TMEM191CA6NGB0 347 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 FAM90A20PA6NIJ5 464 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 M0QYT0 321 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 M0QZQ0 153 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 CTIFO43310 598 aaKnown RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 LARGE1O95461 756 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 TBX18O95935 607 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 TMEM225BP0DP42 221 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 PEPDP12955 493 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 CAPN3P20807 821 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 ZFP36P26651 326 aaKnown RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 CDK7P50613 346 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 EIF5P55010 431 aaKnown RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 EIF4A1P60842 406 aaKnown RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 VAMP2P63027 116 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 EIF2B5Q13144 721 aaKnown RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 TOB2Q14106 344 aaPredicted RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 CLCA4Q14CN2 919 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 LRRC24Q50LG9 513 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 SLC9C2Q5TAH2 1124 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 GRHL2Q6ISB3 625 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 CCDC144NLQ6NUI1 221 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 MAVSQ7Z434 540 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 MRGPRGQ86SM5 289 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 B3GALNT2Q8NCR0 500 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms