RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 ZSCAN5CA6NGD5 496 aaPredicted RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 FAM153BP0C7A2 387 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 PAMP19021 973 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 EPHB2P29323 1055 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 HPDP32754 393 aaPredicted RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 TBX4P57082 545 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 IL9RQ01113 521 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 NRG1Q02297 640 aaPredicted RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 AP1B1Q10567 949 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 FAM153CQ494X1 144 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ATP13A4Q4VNC1 1196 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 RABGAP1LQ5R372 815 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 MSANTD2Q6P1R3 559 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 RTL10Q7L3V2 364 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ZNF557Q8N988 423 aaPredicted RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 NT5C3BQ969T7 300 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 CENPTQ96BT3 561 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 MTBPQ96DY7 904 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 SPG21Q9NZD8 308 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 TJP2Q9UDY2 1190 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 FAM153AQ9UHL3 310 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 MID2Q9UJV3 735 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 CELSR2Q9HCU4 2923 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 GOLGA6L7A0A1B0GV03 622 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 CLDN5O00501 218 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ACSL3O95573 720 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 FGFR3P22607 806 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 CA4P22748 312 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 IL1R2P27930 398 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 HARS2P49590 506 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 SLC5A3P53794 718 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 GEMP55040 296 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ARPP19P56211 112 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 GNGT1P63211 74 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 PSMD5Q16401 504 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 RWDD4Q6NW29 188 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 ZNF449Q6P9G9 518 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 CCDC149Q6ZUS6 474 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ANKS1BQ7Z6G8 1248 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 TDRPQ86YL5 185 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ZNF276Q8N554 614 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 INTS9Q9NV88 658 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 AFF4Q9UHB7 1163 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 ASB3Q9Y575 518 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 USP3Q9Y6I4 520 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 NEFHP12036 1026 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ALDH3A1P30838 453 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 EPHB3P54753 998 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 GEMIN4P57678 1058 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 TLE2Q04725 743 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ADCY1Q08828 1119 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ZNF844Q08AG5 666 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 DNAJC3Q13217 504 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 BTG3Q14201 252 aaPredicted RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 SKIDA1Q1XH10 827 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 PAN2Q504Q3 1202 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 RNASEH2BQ5TBB1 312 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 EMC10Q5UCC4 262 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ZDHHC24Q6UX98 284 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 TAX1BP1Q86VP1 789 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 TSEN2Q8NCE0 465 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 C1orf74Q96LT6 269 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 SEPT5Q99719 369 aaPredicted RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 MAGEB5Q9BZ81 275 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 TKTL2Q9H0I9 626 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 OR12D3Q9UGF7 316 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 TLR6Q9Y2C9 796 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 R3HDM2Q9Y2K5 976 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 NR2E1Q9Y466 385 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 TCRBV7S2A1N4TA0A589 114 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 PFDN6O15212 129 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 IRAK2O43187 625 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 ATP2C2O75185 946 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 SYF2O95926 243 aaKnown RBP6.21□□□□□ -1.41
CYLD-216ENST00000569891 TKTP29401 623 aaKnown RBP6.21□□□□□ -1.41
CYLD-216ENST00000569891 RPL22P35268 128 aaKnown RBP6.21□□□□□ -1.41
CYLD-216ENST00000569891 LLGL1Q15334 1064 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 CLLU1OSQ5K130 101 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 TTC39BQ5VTQ0 682 aaPredicted RBP6.21□□□□□ -1.41
CYLD-216ENST00000569891 KCNT2Q6UVM3 1135 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 PID1Q7Z2X4 250 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 ZNF354CQ86Y25 554 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 DQX1Q8TE96 717 aaKnown RBP6.21□□□□□ -1.41
CYLD-216ENST00000569891 HASPINQ8TF76 798 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 PIK3R5Q8WYR1 880 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 BTN2A3PQ96KV6 586 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 KCTD15Q96SI1 283 aaPredicted RBP6.21□□□□□ -1.41
CYLD-216ENST00000569891 ZBED2Q9BTP6 218 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 LRRC40Q9H9A6 602 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 KCNK9Q9NPC2 374 aa6.21□□□□□ -1.41
CYLD-216ENST00000569891 LSM7Q9UK45 103 aaKnown RBP6.21□□□□□ -1.41
CYLD-216ENST00000569891 TRIP12Q14669 1992 aaPredicted RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 KIAA1671Q9BY89 1806 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 C3orf70A6NLC5 250 aaPredicted RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 PFKLP17858 780 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 MDH1P40925 334 aaKnown RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 NPY2RP49146 381 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 ATN1P54259 1190 aaPredicted RBP6.21□□□□□ -1.42
CYLD-216ENST00000569891 RING1Q06587 406 aa6.21□□□□□ -1.42
CYLD-216ENST00000569891 TRIP4Q15650 581 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms