RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 OR2I1PQ8NGU4 316 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 OR2T3Q8NH03 318 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 SPATA20Q8TB22 786 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 SORCS1Q8WY21 1168 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 IRGQQ8WZA9 623 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 DHTKD1Q96HY7 919 aaPredicted RBP13.68□□□□□ -0.22
SPG7-221ENST00000569720 CEP63Q96MT8 703 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 IRX2Q9BZI1 471 aaPredicted RBP13.68□□□□□ -0.22
SPG7-221ENST00000569720 MIR1-1HGQ9H1L0 117 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 STOML2Q9UJZ1 356 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 ZMIZ1Q9ULJ6 1067 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 AKAP13Q12802 2813 aa13.68□□□□□ -0.22
SPG7-221ENST00000569720 PMM2O15305 246 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 HYAL3O43820 417 aaPredicted RBP13.67□□□□□ -0.22
SPG7-221ENST00000569720 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
SPG7-221ENST00000569720 IGLV3-19P01714 112 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 HLA-FP30511 346 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 SLC11A2P49281 568 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 RGS7P49802 495 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 GRIK2Q13002 908 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 CNGA2Q16280 664 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 ZNF423Q2M1K9 1284 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 PKDCCQ504Y2 493 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 NUGGCQ68CJ6 796 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 TMEM215Q68D42 235 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 MSANTD2Q6P1R3 559 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 CHST9Q7L1S5 443 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 CACUL1Q86Y37 369 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 AHI1Q8N157 1196 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 PPM1KQ8N3J5 372 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 ZCCHC9Q8N567 271 aaKnown RBP13.67□□□□□ -0.22
SPG7-221ENST00000569720 RBBP8NLQ8NC74 664 aaPredicted RBP13.67□□□□□ -0.22
SPG7-221ENST00000569720 ERCC4Q92889 916 aaPredicted RBP13.67□□□□□ -0.22
SPG7-221ENST00000569720 PCED1AQ9H1Q7 454 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 LHX5Q9H2C1 402 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 FBRSQ9HAH7 460 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 ABCB8Q9NUT2 735 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 GGA2Q9UJY4 613 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 MSRB2Q9Y3D2 182 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 ZFHX4Q86UP3 3567 aa13.67□□□□□ -0.22
SPG7-221ENST00000569720 TYW5A2RUC4 315 aaKnown RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 METTL12A8MUP2 240 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 M0QYV0 167 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 BCAT2O15382 392 aaPredicted RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 P4HA2O15460 535 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 IRAK2O43187 625 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 MSI1O43347 362 aaKnown RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 SH3BP5O60239 455 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 GJB3O75712 270 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 FBXO21O94952 628 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 CER1O95813 267 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 LTFP02788 710 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 ATP5BP06576 529 aaKnown RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 PABPC1P11940 636 aaKnown RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 HLA-EP13747 358 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 POLR2EP19388 210 aaKnown RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 CAMK2GQ13555 558 aaPredicted RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 TRIP6Q15654 476 aaKnown RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 MPP7Q5T2T1 576 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 PMF1Q6P1K2 205 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 IL27RAQ6UWB1 636 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 FAM124AQ86V42 546 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 NAXDQ8IW45 347 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 CCDC117Q8IWD4 279 aaPredicted RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPG7-221ENST00000569720 SLC35F5Q8WV83 523 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 GATA6Q92908 595 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 HSFY1Q96LI6 401 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 DDX50Q9BQ39 737 aaKnown RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 SUN2Q9UH99 717 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPG7-221ENST00000569720 ASPMQ8IZT6 3477 aa13.66□□□□□ -0.22
SPG7-221ENST00000569720 MUC22E2RYF6 1773 aaPredicted RBP13.66□□□□□ -0.22
SPG7-221ENST00000569720 FAM208BQ5VWN6 2430 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 CFAP47Q6ZTR5 3102 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 BICDL2A1A5D9 508 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 PIK3R2O00459 728 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 ACSL4O60488 711 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 TBL1XO60907 577 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 DLDP09622 509 aaKnown RBP13.65□□□□□ -0.22
SPG7-221ENST00000569720 TBX4P57082 545 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 ZBTB16Q05516 673 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 RING1Q06587 406 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 MBLAC2Q68D91 279 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 ISM2Q6H9L7 571 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 KLHL10Q6JEL2 608 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 KIAA0907Q7Z7F0 614 aaPredicted RBP13.65□□□□□ -0.22
SPG7-221ENST00000569720 CYB5D2Q8WUJ1 264 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 TFAP2BQ92481 460 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 SNX19Q92543 992 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 AZIN2Q96A70 460 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 TMEM121BQ9BXQ6 578 aaPredicted RBP13.65□□□□□ -0.22
SPG7-221ENST00000569720 TMEM245Q9H330 911 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 EIF2B4Q9UI10 523 aaKnown RBP13.65□□□□□ -0.22
SPG7-221ENST00000569720 KLK13Q9UKR3 277 aa13.65□□□□□ -0.22
SPG7-221ENST00000569720 NUMA1Q14980 2115 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 RNF225M0QZC1 329 aaPredicted RBP13.64□□□□□ -0.23
SPG7-221ENST00000569720 SART1O43290 800 aaKnown RBP13.64□□□□□ -0.23
SPG7-221ENST00000569720 GNA14O95837 355 aa13.64□□□□□ -0.23
SPG7-221ENST00000569720 IGLV3-27P01718 113 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms