RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 BMP1P13497 986 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 SSR1P43307 286 aaKnown RBP24.28■■□□□ 1.48
RAB40C-212ENST00000569575 ZP2Q05996 745 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 DPYSL2Q16555 572 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 C5orf22Q49AR2 442 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 ADGRG2Q8IZP9 1017 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 ATRIPQ8WXE1 791 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 CD101Q93033 1021 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 OR12D3Q9UGF7 316 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 LIMD1Q9UGP4 676 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 F5H5T6 163 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 CYBBP04839 570 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 CTNNA2P26232 953 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 ATXN1P54253 815 aaKnown RBP24.27■■□□□ 1.48
RAB40C-212ENST00000569575 MPPE1Q53F39 396 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 MS4A13Q5J8X5 152 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 NT5DC3Q86UY8 548 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 BBS7Q8IWZ6 715 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 UBL4BQ8N7F7 174 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 FAM71BQ8TC56 605 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 RSPRY1Q96DX4 576 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 EPAS1Q99814 870 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 PRMT1Q99873 361 aaKnown RBP24.27■■□□□ 1.48
RAB40C-212ENST00000569575 PPARGC1AQ9UBK2 798 aaKnown RBP24.27■■□□□ 1.48
RAB40C-212ENST00000569575 PCSK1NQ9UHG2 260 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 AP4E1Q9UPM8 1137 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 JRKLQ9Y4A0 524 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 PCDHA3Q9Y5H8 950 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 CAPN6Q9Y6Q1 641 aa24.27■■□□□ 1.48
RAB40C-212ENST00000569575 KIF26AQ9ULI4 1882 aaPredicted RBP24.26■■□□□ 1.47
RAB40C-212ENST00000569575 MOCS2O96007 188 aaPredicted RBP24.26■■□□□ 1.47
RAB40C-212ENST00000569575 ADH1CP00326 375 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 RARAP10276 462 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 CTNNA1P35221 906 aaKnown RBP24.26■■□□□ 1.47
RAB40C-212ENST00000569575 AMPD2Q01433 879 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 PFKPQ01813 784 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 RABGAP1LQ5R372 815 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 SLC44A3Q8N4M1 653 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 CCDC185Q8N715 623 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 DNASE1L2Q92874 299 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 LRRC3BQ96PB8 259 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 KXD1Q9BQD3 176 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 SNRNP25Q9BV90 132 aaKnown RBP24.26■■□□□ 1.47
RAB40C-212ENST00000569575 MARK1Q9P0L2 795 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 HS3ST4Q9Y661 456 aa24.26■■□□□ 1.47
RAB40C-212ENST00000569575 REV3LO60673 3130 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 IGLV3-10A0A075B6K4 115 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 GFRA2O00451 464 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 TACR2P21452 398 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 IL1R2P27930 398 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 CETN2P41208 172 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 TDGQ13569 410 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 AUHQ13825 339 aaKnown RBP24.25■■□□□ 1.47
RAB40C-212ENST00000569575 EML3Q32P44 896 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 ODF2Q5BJF6 829 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 FAM133BQ5BKY9 247 aaKnown RBP24.25■■□□□ 1.47
RAB40C-212ENST00000569575 CYP4V2Q6ZWL3 525 aaPredicted RBP24.25■■□□□ 1.47
RAB40C-212ENST00000569575 KATNAL2Q8IYT4 538 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 CPA6Q8N4T0 437 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 TMA16Q96EY4 203 aaKnown RBP24.25■■□□□ 1.47
RAB40C-212ENST00000569575 ZWILCHQ9H900 591 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 STIM2Q9P246 746 aa24.25■■□□□ 1.47
RAB40C-212ENST00000569575 DRGXA6NNA5 263 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 ARL4AP40617 200 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 TAS2R40P59535 323 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 COPS2P61201 443 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 SEMA3BQ13214 749 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 PIK3R6Q5UE93 754 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 C1orf228Q6PIY5 440 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 CHSY1Q86X52 802 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 RCOR2Q8IZ40 523 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 HJURPQ8NCD3 748 aaPredicted RBP24.24■■□□□ 1.47
RAB40C-212ENST00000569575 WBP2Q969T9 261 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 EXOC4Q96A65 974 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 MSANTD3Q96H12 275 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 HES6Q96HZ4 224 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 PEBP4Q96S96 227 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 PLA2G2FQ9BZM2 168 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 SIK2Q9H0K1 926 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 BRD9Q9H8M2 597 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 SPHK2Q9NRA0 654 aa24.24■■□□□ 1.47
RAB40C-212ENST00000569575 FGF10O15520 208 aaPredicted RBP24.23■■□□□ 1.47
RAB40C-212ENST00000569575 ZRANB2O95218 330 aaKnown RBP eCLIP24.23■■□□□ 1.472e-6■■■□□ 16.1
RAB40C-212ENST00000569575 GLULP15104 373 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 GDI1P31150 447 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 OXCT1P55809 520 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 RWDD2BP57060 319 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 GAD2Q05329 585 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 PREPLQ4J6C6 727 aaPredicted RBP24.23■■□□□ 1.47
RAB40C-212ENST00000569575 RAB6CQ53S08 254 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 MEI1Q5TIA1 1274 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 MANEALQ5VSG8 457 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 NADSYN1Q6IA69 706 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 KCTD6Q8NC69 237 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 EXD1Q8NHP7 514 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 RIN3Q8TB24 985 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 RBM41Q96IZ5 413 aaKnown RBP24.23■■□□□ 1.47
RAB40C-212ENST00000569575 ZNF670Q9BS34 389 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 SLC2A11Q9BYW1 496 aa24.23■■□□□ 1.47
RAB40C-212ENST00000569575 RAB6CQ9H0N0 254 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms