RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 LRRC32Q14392 662 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 TAF5Q15542 800 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 ANO4Q32M45 955 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 SYPL2Q5VXT5 272 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 H2AFVQ71UI9 128 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 CREG2Q8IUH2 290 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 DENND1CQ8IV53 801 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 CD101Q93033 1021 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 CLDN23Q96B33 292 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 SERPINB11Q96P15 392 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 OSBPL9Q96SU4 736 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 AGPAT1Q99943 283 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 PARD6BQ9BYG5 372 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 ANKZF1Q9H8Y5 726 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 LMAN1LQ9HAT1 526 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 DLGAP2Q9P1A6 1054 aa13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 AGO1Q9UL18 857 aaKnown RBP13.04□□□□□ -0.32
NSMCE1-214ENST00000569236 GRID2IPA4D2P6 1211 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 CCDC151A5D8V7 595 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 GRAP2O75791 330 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 CHRNB1P11230 501 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 GABRB2P47870 512 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 GALK1P51570 392 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 FZD5Q13467 585 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 DCAF6Q58WW2 860 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 TMEM196Q5HYL7 178 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 DGKKQ5KSL6 1271 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 NUGGCQ68CJ6 796 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 SLC26A9Q7LBE3 791 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 TMEM25Q86YD3 366 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 DTWD2Q8NBA8 298 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 NOA1Q8NC60 698 aaKnown RBP13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 EPC1Q9H2F5 836 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 ZNF446Q9NWS9 450 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 RAB21Q9UL25 225 aa13.03□□□□□ -0.32
NSMCE1-214ENST00000569236 ZNF185O15231 689 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 UNGP13051 313 aaPredicted RBP13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 DRD1P21728 446 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 NSFP46459 744 aaKnown RBP13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 TBX4P57082 545 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 RING1Q06587 406 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 NNTQ13423 1086 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 CCINQ13939 588 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 C2CD6Q53TS8 623 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 NAIF1Q69YI7 327 aaPredicted RBP13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 TPGS1Q6ZTW0 290 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 TAC4Q86UU9 113 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 XYLT1Q86Y38 959 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 UNC45BQ8IWX7 931 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 DEFB106AQ8N104 65 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 ADAM32Q8TC27 787 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 CAPZA3Q96KX2 299 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 SLC2A13Q96QE2 648 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 PCDHB18PQ96TA0 734 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 BBS2Q9BXC9 721 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 KCNH6Q9H252 994 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 TLR6Q9Y2C9 796 aa13.02□□□□□ -0.32
NSMCE1-214ENST00000569236 NEDD8-MDP1E9PL57 170 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 PDE2AO00408 941 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 HOXC11O43248 304 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 DAB1O75553 588 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 TRUB2O95900 331 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 IGLV3-27P01718 113 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 TMEM253P0C7T8 217 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 MMP8P22894 467 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 SCNN1AP37088 669 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 OPRD1P41143 372 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 EIF2DP41214 584 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 CENPCQ03188 943 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 BRD3Q15059 726 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 CLEC16AQ2KHT3 1053 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 GAB4Q2WGN9 574 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 FAM102AQ5T9C2 384 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 MEI1Q5TIA1 1274 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 TMCO3Q6UWJ1 677 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 MMS22LQ6ZRQ5 1243 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 SYNPOQ8N3V7 929 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 COG1Q8WTW3 980 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 FAM204AQ9H8W3 233 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 FBRSL1Q9HCM7 1045 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 RBM12Q9NTZ6 932 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 SPATA6Q9NWH7 488 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 MARK1Q9P0L2 795 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 WDR35Q9P2L0 1181 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 RNF14Q9UBS8 474 aa13.02□□□□□ -0.33
NSMCE1-214ENST00000569236 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.01□□□□□ -0.33
NSMCE1-214ENST00000569236 GOLGA8SH3BPF8 625 aa13.01□□□□□ -0.33
NSMCE1-214ENST00000569236 IRAK2O43187 625 aa13.01□□□□□ -0.33
NSMCE1-214ENST00000569236 ZRANB2O95218 330 aaKnown RBP eCLIP13.01□□□□□ -0.33
NSMCE1-214ENST00000569236 LATS1O95835 1130 aa13.01□□□□□ -0.33
NSMCE1-214ENST00000569236 TNFAIP3P21580 790 aa13.01□□□□□ -0.33
NSMCE1-214ENST00000569236 GBP1P32455 592 aa13.01□□□□□ -0.33
NSMCE1-214ENST00000569236 NOS2P35228 1153 aa13.01□□□□□ -0.33
NSMCE1-214ENST00000569236 SLC6A11P48066 632 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms