RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TIRAPP58753 221 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 POU5F1BQ06416 359 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 ZNF543Q08ER8 600 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 STK3Q13188 491 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 ITPK1Q13572 414 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 DAG1Q14118 895 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 RRS1Q15050 365 aaKnown RBP3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 SAFBQ15424 915 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 RRAGBQ5VZM2 374 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 KIRREL2Q6UWL6 708 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 ZNF804AQ7Z570 1209 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 YAF2Q8IY57 180 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 VPS37AQ8NEZ2 397 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 ABHD11Q8NFV4 315 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 SEMA6DQ8NFY4 1073 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 IP6K1Q92551 441 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 WDYHV1Q96HA8 205 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 NAP1L4Q99733 375 aaKnown RBP3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 ELAC2Q9BQ52 826 aaKnown RBP3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 SENP7Q9BQF6 1050 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 BRIP1Q9BX63 1249 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 VN1R3Q9BXE9 311 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 UNKQ9C0B0 810 aaKnown RBP3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 GJB4Q9NTQ9 266 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 TBC1D23Q9NUY8 699 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 ZNF212Q9UDV6 495 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 CAPN11Q9UMQ6 739 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 PHTF1Q9UMS5 762 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 KIF20BQ96Q89 1820 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 COL5A3P25940 1745 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 A0A0U1RQG5 324 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 LINC01548A6NM66 108 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 RHPN2P1A8MT19 583 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 SPRY2O43597 315 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 EXOC3O60645 756 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 IL18RAPO95256 599 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 LATS1O95835 1130 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 PRKCBP05771 671 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 ANXA2P07355 339 aaKnown RBP3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 PARP1P09874 1014 aaKnown RBP3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 TSHRP16473 764 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 BDNFP23560 247 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 EPHA3P29320 983 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 CHRNA5P30532 468 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 HOXC9P31274 260 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 PRKAR1BP31321 381 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 PRIM2P49643 509 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 GATMP50440 423 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 CASP5P51878 434 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 PGDP52209 483 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 HOXA4Q00056 320 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 LMOD3Q0VAK6 560 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 FHL3Q13643 280 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 MANEALQ5VSG8 457 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 PRAMEF17Q5VTA0 474 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 SUMO4Q6EEV6 95 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 TRIM72Q6ZMU5 477 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 ZNF66Q6ZN08 573 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 TOGARAM2Q6ZUX3 1019 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 CHSY1Q86X52 802 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 LIX1LQ8IVB5 337 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 SRRM1Q8IYB3 904 aaKnown RBP3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 METTL25Q8N6Q8 603 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 RNF152Q8N8N0 203 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 PARD3BQ8TEW8 1205 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 PIGBQ92521 554 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 TBCBQ99426 244 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 NAA15Q9BXJ9 866 aaKnown RBP3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 ASAP1Q9ULH1 1129 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 RIMKLBQ9ULI2 386 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 USP22Q9UPT9 525 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 MAP3K19Q56UN5 1328 aa3.92□□□□□ -1.78
HMGB1P6-201ENST00000569046 TCRBV5S1A1TA0A578 114 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 POM121BA6NF01 834 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 AQP7P3A6NL99 342 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 CES2O00748 559 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 NPHP1O15259 732 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 DLDP09622 509 aaKnown RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 MCM5P33992 734 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 RENBPP51606 427 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 ALDH5A1P51649 535 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 SRSF4Q08170 494 aaKnown RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 TBC1D25Q3MII6 688 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 ANO1Q5XXA6 986 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 USP49Q70CQ1 688 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 RNF44Q7L0R7 432 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 BCDIN3DQ7Z5W3 292 aaKnown RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 SKAP1Q86WV1 359 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 SIRT6Q8N6T7 355 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 C11orf44Q8N8P7 122 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 ENAHQ8N8S7 591 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 TERB1Q8NA31 727 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 GJA10Q969M2 543 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 SNX18Q96RF0 628 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 SELENOOQ9BVL4 669 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 INO80BQ9C086 356 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 CIPCQ9C0C6 399 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 PNPLA8Q9NP80 782 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 ASIC5Q9NY37 505 aa3.91□□□□□ -1.78
HMGB1P6-201ENST00000569046 LUZP4Q9P127 313 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms