RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 HOXD9P28356 352 aaPredicted RBP13.04□□□□□ -0.32
SNX29-207ENST00000568949 ACADVLP49748 655 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 ZNF445P59923 1031 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 HES3Q5TGS1 186 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 FBXL19Q6PCT2 694 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 GATAD2AQ86YP4 633 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNX29-207ENST00000568949 IQUBQ8NA54 791 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 SAP25Q8TEE9 199 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 CYB5D2Q8WUJ1 264 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 TMEM174Q8WUU8 243 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 TSC1Q92574 1164 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 FGF11Q92914 225 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 PLD4Q96BZ4 506 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 TWNKQ96RR1 684 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 USP28Q96RU2 1077 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 CYP3A43Q9HB55 503 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 SUN2Q9UH99 717 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 SCML1Q9UN30 329 aa13.04□□□□□ -0.32
SNX29-207ENST00000568949 SLC12A8A0AV02 714 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 J3QKU1 62 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 ABCB4P21439 1286 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 HLA-FP30511 346 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 CFHR1Q03591 330 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 ILKQ13418 452 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 SHBQ15464 509 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 TRIP4Q15650 581 aaPredicted RBP13.03□□□□□ -0.32
SNX29-207ENST00000568949 C8orf34Q49A92 452 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 ZNF776Q68DI1 518 aaPredicted RBP13.03□□□□□ -0.32
SNX29-207ENST00000568949 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 SV2AQ7L0J3 742 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 CHST9Q7L1S5 443 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
SNX29-207ENST00000568949 KIAA0907Q7Z7F0 614 aaPredicted RBP13.03□□□□□ -0.32
SNX29-207ENST00000568949 ADIPOR2Q86V24 386 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 SLC9A9Q8IVB4 645 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 AHI1Q8N157 1196 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 DHX58Q96C10 678 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 TMEM176AQ96HP8 235 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 UBXN6Q9BZV1 441 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 DMAC2Q9NW81 257 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 NCKAP1Q9Y2A7 1128 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 PLXNA2O75051 1894 aa13.03□□□□□ -0.32
SNX29-207ENST00000568949 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 CBX4O00257 560 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 IKBKBO14920 756 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 KIF20AO95235 890 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 ATP5BP06576 529 aaKnown RBP13.02□□□□□ -0.33
SNX29-207ENST00000568949 DLDP09622 509 aaKnown RBP13.02□□□□□ -0.33
SNX29-207ENST00000568949 PABPC1P11940 636 aaKnown RBP13.02□□□□□ -0.33
SNX29-207ENST00000568949 PIK3CAP42336 1068 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 CLDN6P56747 220 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 DLG4P78352 724 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
SNX29-207ENST00000568949 DNAJC3Q13217 504 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 PPP1R26Q5T8A7 1209 aaPredicted RBP13.02□□□□□ -0.33
SNX29-207ENST00000568949 ZNF366Q8N895 744 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 WBP1Q96G27 269 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 SLC6A18Q96N87 628 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 ARID3AQ99856 593 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 BACH2Q9BYV9 841 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 RSPH9Q9H1X1 276 aaPredicted RBP13.02□□□□□ -0.33
SNX29-207ENST00000568949 PABPC3Q9H361 631 aaKnown RBP13.02□□□□□ -0.33
SNX29-207ENST00000568949 SLC39A2Q9NP94 309 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 GGA2Q9UJY4 613 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 STOML2Q9UJZ1 356 aa13.02□□□□□ -0.33
SNX29-207ENST00000568949 C10orf142B7Z368 130 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 ERVH48-1M5A8F1 160 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 LATS1O95835 1130 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 HLA-DRAP01903 254 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 WNT1P04628 370 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 ACTN2P35609 894 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 NASPP49321 788 aaPredicted RBP13.01□□□□□ -0.33
SNX29-207ENST00000568949 ARRB1P49407 418 aaPredicted RBP13.01□□□□□ -0.33
SNX29-207ENST00000568949 HARS2P49590 506 aaKnown RBP13.01□□□□□ -0.33
SNX29-207ENST00000568949 GALCP54803 685 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 YWHAGP61981 247 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNX29-207ENST00000568949 TLE3Q04726 772 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 CUL4AQ13619 759 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 RAB41Q5JT25 222 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 PRAMEF14Q5SWL7 426 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 MBLAC2Q68D91 279 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 PCSK4Q6UW60 755 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 EID2Q8N6I1 236 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 LINC00301Q8NCQ3 95 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 RFFLQ8WZ73 363 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 TMA16Q96EY4 203 aaKnown RBP13.01□□□□□ -0.33
SNX29-207ENST00000568949 IMPG2Q9BZV3 1241 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 GDF3Q9NR23 364 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 OLA1Q9NTK5 396 aaKnown RBP13.01□□□□□ -0.33
SNX29-207ENST00000568949 FBXL12Q9NXK8 326 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 TPX2Q9ULW0 747 aaKnown RBP13.01□□□□□ -0.33
SNX29-207ENST00000568949 HBS1LQ9Y450 684 aaKnown RBP13.01□□□□□ -0.33
SNX29-207ENST00000568949 SPTA1P02549 2419 aa13.01□□□□□ -0.33
SNX29-207ENST00000568949 MYO18BQ8IUG5 2567 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms