RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	STIM2	Q9P246	746 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	STAP1	Q9ULZ2	295 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	STON1	Q9Y6Q2	735 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	PLXND1	Q9Y4D7	1925 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	MYO15A	Q9UKN7	3530 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782		F5H5T6	163 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	DCLK1	O15075	740 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	CAVIN2	O95810	425 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	IGLV3-27	P01718	113 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	EPHX1	P07099	455 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	CYP11B1	P15538	503 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	HOXD9	P28356	352 aa	Predicted RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	NNMT	P40261	264 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	P2RY2	P41231	377 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	OXCT1	P55809	520 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	TPM4	P67936	248 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	SLC6A3	Q01959	620 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	UBXN1	Q04323	297 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	KCNMA1	Q12791	1236 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	SFSWAP	Q12872	951 aa	Known RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	KRT31	Q15323	416 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	GEN1	Q17RS7	908 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	FILIP1L	Q4L180	1135 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	FNDC3B	Q53EP0	1204 aa	Known RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	RABGAP1L	Q5R372	815 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	PIK3R6	Q5UE93	754 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	SYPL2	Q5VXT5	272 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	RNF219	Q5W0B1	726 aa	Predicted RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	PMS2CL	Q68D20	193 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	RFWD3	Q6PCD5	774 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	CHST9	Q7L1S5	443 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	CHSY1	Q86X52	802 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	CARNMT1	Q8N4J0	409 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	ADAM32	Q8TC27	787 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	RLN3	Q8WXF3	142 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	DDX1	Q92499	740 aa	Known RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	PRCC	Q92733	491 aa	Predicted RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	C18orf8	Q96DM3	657 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	PIWIL1	Q96J94	861 aa	Known RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	CPXM1	Q96SM3	734 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	GABRG3	Q99928	467 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	RTKN	Q9BST9	563 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	PRDM16	Q9HAZ2	1276 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	ABCB8	Q9NUT2	735 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	DDIT4	Q9NX09	232 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	COX16	Q9P0S2	106 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	THAP10	Q9P2Z0	257 aa	Predicted RBP	10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	SUN2	Q9UH99	717 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	GGA2	Q9UJY4	613 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	FHOD1	Q9Y613	1164 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	OTOGL	Q3ZCN5	2332 aa		10.76	□□□□□ -0.69
UBR1-207	ENST00000568782	PI4KA	P42356	2102 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	KCNU1	A8MYU2	1149 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	KHNYN	O15037	678 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	GABBR2	O75899	941 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	LSM8	O95777	96 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	F9	P00740	461 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	PABPC1	P11940	636 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	DES	P17661	470 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	GABRG2	P18507	467 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	HOXC13	P31276	330 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	NOS2	P35228	1153 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	STAT1	P42224	750 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	COPB1	P53618	953 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	RNASE9	P60153	205 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	POLR2F	P61218	127 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	RPL6	Q02878	288 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	NME3	Q13232	169 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	ZNF234	Q14588	700 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	SYCP2L	Q5T4T6	812 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	ACBD5	Q5T8D3	534 aa	Predicted RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	TTC39B	Q5VTQ0	682 aa	Predicted RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	CDKAL1	Q5VV42	579 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	TAF3	Q5VWG9	929 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	FAM183BP	Q6ZVS7	135 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	RABEPK	Q7Z6M1	372 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	TAC4	Q86UU9	113 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	LGI2	Q8N0V4	545 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	DEFB106A	Q8N104	65 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	PIGK	Q92643	395 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	RMDN1	Q96DB5	314 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	FCRL2	Q96LA5	508 aa	Predicted RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	ACOX2	Q99424	681 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	NUSAP1	Q9BXS6	441 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	WDCP	Q9H6R7	721 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	FBRS	Q9HAH7	460 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	CALCOCO1	Q9P1Z2	691 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	CYTH4	Q9UIA0	394 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	RAD54B	Q9Y620	910 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	FRYL	O94915	3013 aa		10.75	□□□□□ -0.69
UBR1-207	ENST00000568782	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.74	□□□□□ -0.69
UBR1-207	ENST00000568782	GOLGA6L7	A0A1B0GV03	622 aa		10.74	□□□□□ -0.69

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