RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 DENND5BQ6ZUT9 1274 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 ANKS4BQ8N8V4 417 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 SLC44A1Q8WWI5 657 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 P2RY11Q96G91 374 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 TGS1Q96RS0 853 aaKnown RBP18.71■□□□□ 0.59
SMPD3-211ENST00000568373 XAB2Q9HCS7 855 aaKnown RBP18.71■□□□□ 0.59
SMPD3-211ENST00000568373 FGFR1OP2Q9NVK5 253 aa18.71■□□□□ 0.59
SMPD3-211ENST00000568373 GOLGA6L7A0A1B0GV03 622 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 RNF103O00237 685 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 OPHN1O60890 802 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 HCAR3P49019 387 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 CXCR3P49682 368 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 TPI1P60174 286 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 YWHAHQ04917 246 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-211ENST00000568373 ITIH4Q14624 930 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 RNF187Q5TA31 235 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-211ENST00000568373 NUGGCQ68CJ6 796 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 C10orf67Q8IYJ2 551 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 NETO2Q8NC67 525 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 PCDHB8Q9UN66 801 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 TTLL3Q9Y4R7 772 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 PATJQ8NI35 1801 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 B4GALT3O60512 393 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 C1QAP02745 245 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 ERCC2P18074 760 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 CA4P22748 312 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 RPA3P35244 121 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-211ENST00000568373 CDK16Q00536 496 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 DSC1Q08554 894 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 SPARCL1Q14515 664 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 CLLU1OSQ5K130 101 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 PDZD4Q76G19 769 aaPredicted RBP18.7■□□□□ 0.58
SMPD3-211ENST00000568373 ZNF280BQ86YH2 543 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 SLC43A3Q8NBI5 491 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 CCNYQ8ND76 341 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 LINC01599Q8WXQ3 324 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 WDCPQ9H6R7 721 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 PLAC1Q9HBJ0 212 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 IKBKGQ9Y6K9 419 aa18.7■□□□□ 0.58
SMPD3-211ENST00000568373 A0A1W2PQ45 241 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 A0A1W2PQY0 241 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 SNX3O60493 162 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 CPP00450 1065 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 INHBAP08476 426 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 GSTA2P09210 222 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 MAGEA9P43362 315 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 C1QTNF8P60827 252 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 LHX8Q68G74 356 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 CCDC121Q6ZUS5 278 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 TAC4Q86UU9 113 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 COLGALT1Q8NBJ5 622 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 SIGLEC10Q96LC7 697 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 PAIP2Q9BPZ3 127 aaKnown RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 TRIM62Q9BVG3 475 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 RAD54BQ9Y620 910 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 IQANK1A0A1B0GTG1 560 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 TRDMT1O14717 391 aaKnown RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 DDHD2O94830 711 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 GBP2P32456 591 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 ZNF135P52742 658 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 FAM189BP81408 668 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 SARNPP82979 210 aaKnown RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 NOMO2Q5JPE7 1267 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 C4orf50Q6ZRC1 276 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 BEND5Q7L4P6 421 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 PRPF39Q86UA1 669 aaKnown RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 SPATA2LQ8IUW3 424 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 EBNA1BP2Q99848 306 aaKnown RBP18.69■□□□□ 0.58
SMPD3-211ENST00000568373 TKTL2Q9H0I9 626 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 STARD7Q9NQZ5 370 aa18.69■□□□□ 0.58
SMPD3-211ENST00000568373 ZNF189O75820 626 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-211ENST00000568373 OAS1P00973 400 aaKnown RBP18.68■□□□□ 0.58
SMPD3-211ENST00000568373 INHAP05111 366 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 TAC1P20366 129 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 PRKCHP24723 683 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 FOXN2P32314 431 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 GRIA1P42261 906 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 WASHC5Q12768 1159 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 TP53INP2Q8IXH6 220 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 SCAMP5Q8TAC9 235 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 URGCPQ8TCY9 931 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 DQX1Q8TE96 717 aaKnown RBP18.68■□□□□ 0.58
SMPD3-211ENST00000568373 ALKBH8Q96BT7 664 aaKnown RBP18.68■□□□□ 0.58
SMPD3-211ENST00000568373 EPAS1Q99814 870 aa18.68■□□□□ 0.58
SMPD3-211ENST00000568373 EIF2B3Q9NR50 452 aaKnown RBP18.68■□□□□ 0.58
SMPD3-211ENST00000568373 TMEM189-UBE2V1I3L0A0 370 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 ZWINTO95229 277 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 APOEP02649 317 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 MLNP12872 115 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 UNC5AQ6ZN44 842 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 SLC26A11Q86WA9 606 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 SEPT10Q9P0V9 454 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 OR12D3Q9UGF7 316 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 MAD1L1Q9Y6D9 718 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 NCAM2O15394 837 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 GNRH1P01148 92 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 MAP2K2P36507 400 aa18.67■□□□□ 0.58
SMPD3-211ENST00000568373 SF3A3Q12874 501 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMPD3-211ENST00000568373 SLC1A5Q15758 541 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms