RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MYO5AQ9Y4I1 1855 aaKnown RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 IGLV3-22A0A075B6J6 115 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 SYCE1LA8MT33 242 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 CLOCKO15516 846 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 LRCH4O75427 683 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 TIPRLO75663 272 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 GPD1P21695 349 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 PHKA2P46019 1235 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 IDH3AP50213 366 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 EGFLAMQ63HQ2 1017 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 MAP4K3Q8IVH8 894 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 DDIASQ8IXT1 998 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 CLEC4FQ8N1N0 589 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 LRRC71Q8N4P6 559 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 WNK4Q96J92 1243 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 CCDC28BQ9BUN5 200 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 TLE6Q9H808 572 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 TRPC7Q9HCX4 862 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 C6orf203Q9P0P8 240 aaPredicted RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 RUVBL2Q9Y230 463 aaKnown RBP11.19□□□□□ -0.62
PALB2-206ENST00000568219 ARFGEF2Q9Y6D5 1785 aa11.19□□□□□ -0.62
PALB2-206ENST00000568219 ATP6AP2A0A1C7CYW4 349 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 AP3B1O00203 1094 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ZSCAN9O15535 394 aaPredicted RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 ATP6AP2O75787 350 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 PARNO95453 639 aaKnown RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 PIK3R1P27986 724 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ADORA2BP29275 332 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ATICP31939 592 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 SFNP31947 248 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 GRIA3P42263 894 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 THOP1P52888 689 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 OGDHQ02218 1023 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 PLCL1Q15111 1095 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ZIK1Q3SY52 487 aaPredicted RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 SH3PXD2AQ5TCZ1 1133 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ZNF781Q8N8C0 355 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 NAT8LQ8N9F0 302 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 SEPHS2Q99611 448 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 NRBP2Q9NSY0 501 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 TRIM13O60858 407 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 MT-ND1P03886 318 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 LSM3P62310 102 aaKnown RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 GABPAQ06546 454 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 EMC2Q15006 297 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ZACNQ401N2 412 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 TBCELQ5QJ74 424 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 APOBEC3HQ6NTF7 200 aaKnown RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 BSNDQ8WZ55 320 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 COQ10BQ9H8M1 238 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 CHST12Q9NRB3 414 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ZNF23P17027 643 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 ITGAXP20702 1163 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 TGM2P21980 687 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 IL1R2P27930 398 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 YWHAZP63104 245 aaKnown RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 CCNIQ14094 377 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 PITRM1Q5JRX3 1037 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 C1orf220Q5T0J3 134 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 SLC9A4Q6AI14 798 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 KCNT2Q6UVM3 1135 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 KYAT3Q6YP21 454 aaKnown RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 SCUBE3Q8IX30 993 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 LRTOMTQ8WZ04 291 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 DDX1Q92499 740 aaKnown RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 APOBEC3GQ9HC16 384 aaKnown RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 TMEM216Q9P0N5 145 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 C5P01031 1676 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 RGSL1A5PLK6 1076 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 BCL10O95999 233 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 SLC4A1P02730 911 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 NR3C2P08235 984 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 TSPAN8P19075 237 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 MAGP20916 626 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 CDH3P22223 829 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 MPSTP25325 297 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 SLC18A1P54219 525 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 PHF13Q86YI8 300 aaPredicted RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 MPP5Q8N3R9 675 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 NAT16Q8N8M0 369 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 AZIN2Q96A70 460 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 PKP2Q99959 881 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 DGCR6LQ9BY27 220 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 C17orf75Q9HAS0 396 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 JPH1Q9HDC5 661 aaPredicted RBP11.18□□□□□ -0.62
PALB2-206ENST00000568219 RNF146Q9NTX7 359 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 EGFL7Q9UHF1 273 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 LMO7Q8WWI1 1683 aa11.18□□□□□ -0.62
PALB2-206ENST00000568219 PTGES3LE9PB15 166 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 TP73O15350 636 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 AMHR2Q16671 573 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 OGFOD2Q6N063 350 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 SAPCD2Q86UD0 394 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 RBM12BQ8IXT5 1001 aaKnown RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 OFCC1Q8IZS5 231 aa11.17□□□□□ -0.62
PALB2-206ENST00000568219 ZBTB8BQ8NAP8 495 aaPredicted RBP11.17□□□□□ -0.62
PALB2-206ENST00000568219 ZNF516Q92618 1163 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms