RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	NIF3L1	Q9GZT8	377 aa		11.9	□□□□□ -0.5
TCF4-238	ENST00000568169	BTBD1	Q9H0C5	482 aa		11.9	□□□□□ -0.5
TCF4-238	ENST00000568169	PRSS16	Q9NQE7	514 aa		11.9	□□□□□ -0.5
TCF4-238	ENST00000568169	PLA2G4C	Q9UP65	541 aa		11.9	□□□□□ -0.5
TCF4-238	ENST00000568169	CELSR3	Q9NYQ7	3312 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	FSBP	O95073	299 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	ZIC2	O95409	532 aa	Predicted RBP	11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	CD58	P19256	250 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	ABCG1	P45844	678 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	ZNF445	P59923	1031 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	YWHAG	P61981	247 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	PPP3CA	Q08209	521 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	INAVA	Q3KP66	663 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	FNDC3B	Q53EP0	1204 aa	Known RBP	11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	CCDC157	Q569K6	752 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	CEP135	Q66GS9	1140 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	PM20D1	Q6GTS8	502 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	CHST9	Q7L1S5	443 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	ADIPOR2	Q86V24	386 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	PIGZ	Q86VD9	579 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	GRAMD1C	Q8IYS0	662 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	ZNF366	Q8N895	744 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	TAS1R2	Q8TE23	839 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	HEXIM2	Q96MH2	286 aa	Known RBP	11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	ARID3A	Q99856	593 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	DNAI2	Q9GZS0	605 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	SGK2	Q9HBY8	427 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	FTSJ1	Q9UET6	329 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	STOML2	Q9UJZ1	356 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	FRMD4B	Q9Y2L6	1034 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	PCDHGA1	Q9Y5H4	931 aa		11.89	□□□□□ -0.51
TCF4-238	ENST00000568169	LOC400499	M0QZD8	3231 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169		A0A1B0GTQ1	180 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	TK2	O00142	265 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	VILL	O15195	856 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	IGHV4-34	P06331	123 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	PABPC1	P11940	636 aa	Known RBP	11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	GCLM	P48507	274 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	BCAT1	P54687	386 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	RACK1	P63244	317 aa	Known RBP	11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	C19orf57	Q0VDD7	668 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	KMT5B	Q4FZB7	885 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	ZNF394	Q53GI3	561 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	RESP18	Q5W5W9	173 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	ARHGAP17	Q68EM7	881 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	KIAA0895L	Q68EN5	471 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	BHLHA9	Q7RTU4	235 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	TMA16	Q96EY4	203 aa	Known RBP	11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	ABCB8	Q9NUT2	735 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	EXOC1	Q9NV70	894 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	FAM13B	Q9NYF5	915 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	PCDHA7	Q9UN72	937 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	TRAF3IP3	Q9Y228	551 aa		11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	HBS1L	Q9Y450	684 aa	Known RBP	11.88	□□□□□ -0.51
TCF4-238	ENST00000568169	PLK4	O00444	970 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	LATS1	O95835	1130 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ZBED1	O96006	694 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	DNTT	P04053	509 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	PRB1	P04280	392 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	DLD	P09622	509 aa	Known RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	C1S	P09871	688 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	SLFN14	P0C7P3	912 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	TRIM49	P0CI25	452 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	TRIM49C	P0CI26	452 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	CDK4	P11802	303 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	PDIA4	P13667	645 aa	Known RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ITPKB	P27987	946 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	HARS2	P49590	506 aa	Known RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	TKTL1	P51854	596 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	RAD23B	P54727	409 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	MCCD1	P59942	119 aa	Predicted RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	IL9R	Q01113	521 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ENPEP	Q07075	957 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	TTC31	Q49AM3	519 aa	Predicted RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ADGRF1	Q5T601	910 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	MBLAC2	Q68D91	279 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ZNF776	Q68DI1	518 aa	Predicted RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	USP30	Q70CQ3	517 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	INTS8	Q75QN2	995 aa	Known RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ADAT2	Q7Z6V5	191 aa	Known RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	GATAD2A	Q86YP4	633 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	FMNL3	Q8IVF7	1028 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	CEP57L1	Q8IYX8	460 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	AHI1	Q8N157	1196 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ANKRD52	Q8NB46	1076 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	SLC4A11	Q8NBS3	891 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	PIP4K2C	Q8TBX8	421 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	SLC39A7	Q92504	469 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	NDRG1	Q92597	394 aa	Known RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	GOLGA1	Q92805	767 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	COL26A1	Q96A83	441 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	NXPE2	Q96DL1	559 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	FAXDC2	Q96IV6	333 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ACE2	Q9BYF1	805 aa	Predicted RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	ULBP1	Q9BZM6	244 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	PRORY	Q9H606	182 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	OLA1	Q9NTK5	396 aa	Known RBP	11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms