RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-221ENST00000567935 YJEFN3A6XGL0 299 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 E7ENQ6 273 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 UPP2O95045 317 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 USP17L7P0C7H9 530 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 LINC00271P0C7V0 271 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 CYP2F1P24903 491 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 CACNA2D1P54289 1103 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 MMRN1Q13201 1228 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 ZC3H12AQ5D1E8 599 aaKnown RBP15.13■□□□□ 0.01
COMMD4-221ENST00000567935 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
COMMD4-221ENST00000567935 GPRIN1Q7Z2K8 1008 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 LRRTM3Q86VH5 581 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 CDKL3Q8IVW4 592 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-221ENST00000567935 ARHGAP18Q8N392 663 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 ZCCHC9Q8N567 271 aaKnown RBP15.13■□□□□ 0.01
COMMD4-221ENST00000567935 PLD5Q8N7P1 536 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 CEP295NLQ96MC4 621 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 FBXO44Q9H4M3 255 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 TMLHEQ9NVH6 421 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 COMMD8Q9NX08 183 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 DNAJB4Q9UDY4 337 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 USP15Q9Y4E8 981 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-221ENST00000567935 RAD54BQ9Y620 910 aa15.13■□□□□ 0.01
COMMD4-221ENST00000567935 BCLAF3A2AJT9 711 aaKnown RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 HACD1B0YJ81 288 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 HMGB1P1B2RPK0 211 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 C5orf67F2Z3F1 127 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 FYNP06241 537 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 MYZAPP0CAP1 466 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 NCAM1P13591 858 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 TFE3P19532 575 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 ACTN2P35609 894 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 HCAR3P49019 387 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 SLC11A1P49279 550 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 GPS1Q13098 491 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 TRIP13Q15645 432 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 P3H1Q32P28 736 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 CTXN3Q4LDR2 81 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 RAB6CQ53S08 254 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 PPP6R3Q5H9R7 873 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 OTUD1Q5VV17 481 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 FUT10Q6P4F1 479 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 ANKS3Q6ZW76 656 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 PDZD4Q76G19 769 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 BHLHA9Q7RTU4 235 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 FAM131BQ86XD5 332 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 PQLC3Q8N755 202 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 PCDH19Q8TAB3 1148 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 SPPL2BQ8TCT7 592 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 TOP1MTQ969P6 601 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 RTP4Q96DX8 246 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 CSPG4P5Q96PW8 444 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 FAM118BQ9BPY3 351 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 FERMT1Q9BQL6 677 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 TMEM121Q9BTD3 319 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 TMEM109Q9BVC6 243 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 RAB6CQ9H0N0 254 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 LMAN2LQ9H0V9 348 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 ABCC13Q9NSE7 274 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 TMEM30AQ9NV96 361 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 GPATCH2LQ9NWQ4 482 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 NFS1Q9Y697 457 aa15.12■□□□□ 0.01
COMMD4-221ENST00000567935 TPRP12270 2363 aaKnown RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 FNDC1Q4ZHG4 1894 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-221ENST00000567935 GOLGA6CA6NDK9 693 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 A6NNZ2 444 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 TNFRSF10BO14763 440 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 POLR3GO15318 223 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-221ENST00000567935 TP73O15350 636 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 GALTP07902 379 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 GOLGA6DP0CG33 693 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 PECAM1P16284 738 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-221ENST00000567935 HTR7P34969 479 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 ADRA1BP35368 520 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 GRIK1P39086 918 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 IFFO1Q0D2I5 559 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 CA9Q16790 459 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 TUBB8Q3ZCM7 444 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 SLC39A12Q504Y0 691 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 CEP85LQ5SZL2 805 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 FAM171A1Q5VUB5 890 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 SYPL2Q5VXT5 272 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 BSPRYQ5W0U4 402 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 DARS2Q6PI48 645 aaKnown RBP15.11■□□□□ 0.01
COMMD4-221ENST00000567935 PPIL6Q8IXY8 311 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 CCDC185Q8N715 623 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 SLC7A14Q8TBB6 771 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 TTC25Q96NG3 672 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 KCTD15Q96SI1 283 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-221ENST00000567935 TMEM209Q96SK2 561 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 PHF7Q9BWX1 381 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-221ENST00000567935 FRMD8Q9BZ67 464 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-221ENST00000567935 FAM204AQ9H8W3 233 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 MARCH5Q9NX47 278 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 GOLGA6AQ9NYA3 693 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 VPS18Q9P253 973 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 PAK5Q9P286 719 aa15.11■□□□□ 0.01
COMMD4-221ENST00000567935 FBXW11Q9UKB1 542 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms