RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 EBNA1BP2Q99848 306 aaKnown RBP18.29■□□□□ 0.52
CMTM3-214ENST00000567572 RAB6CQ9H0N0 254 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 CACNG4Q9UBN1 327 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 SQORQ9Y6N5 450 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 SF3B1O75533 1304 aaKnown RBP eCLIP18.29■□□□□ 0.52
CMTM3-214ENST00000567572 FRMPD3Q5JV73 1810 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 A0A0U1RQF3 1178 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 CCDC22O60826 627 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 LMNAP02545 664 aaKnown RBP18.29■□□□□ 0.52
CMTM3-214ENST00000567572 ADORA2BP29275 332 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 FDFT1P37268 417 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 SCNN1GP51170 649 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 NRLP54845 237 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 SLC8A3P57103 927 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 NAB1Q13506 487 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 CA9Q16790 459 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 PLEKHG4Q58EX7 1191 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 ATG16L1Q676U5 607 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 CCNJLQ8IV13 435 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 PPM1NQ8N819 430 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 B3GALNT2Q8NCR0 500 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 SLC2A14Q8TDB8 520 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 SKA1Q96BD8 255 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 THOC1Q96FV9 657 aaKnown RBP18.29■□□□□ 0.52
CMTM3-214ENST00000567572 TSEN34Q9BSV6 310 aaKnown RBP18.29■□□□□ 0.52
CMTM3-214ENST00000567572 TBC1D10AQ9BXI6 508 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 ADAM33Q9BZ11 813 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 EIF2B3Q9NR50 452 aaKnown RBP18.29■□□□□ 0.52
CMTM3-214ENST00000567572 GPATCH2LQ9NWQ4 482 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 AP4E1Q9UPM8 1137 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 HGSO14964 777 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-214ENST00000567572 INHAP05111 366 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 TKTP29401 623 aaKnown RBP18.28■□□□□ 0.52
CMTM3-214ENST00000567572 CLCNKBP51801 687 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 EFHC1Q5JVL4 640 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 STXBP5Q5T5C0 1151 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 WSCD1Q658N2 575 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 LHX8Q68G74 356 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 TIFABQ6ZNK6 161 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 MTDHQ86UE4 582 aaKnown RBP18.28■□□□□ 0.52
CMTM3-214ENST00000567572 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 CTAGE3PQ8IX95 158 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 PTPRN2Q92932 1015 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 SENP8Q96LD8 212 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 GLT1D1Q96MS3 346 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 KLF6Q99612 283 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-214ENST00000567572 FERMT1Q9BQL6 677 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 RNPEPL1Q9HAU8 725 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 KANSL3Q9P2N6 904 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 PLLPQ9Y342 182 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 BRCA2P51587 3418 aa18.28■□□□□ 0.52
CMTM3-214ENST00000567572 WDR91A4D1P6 747 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 I3L4J1 428 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 BIRC5O15392 142 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 AVILO75366 819 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 DLDP09622 509 aaKnown RBP18.27■□□□□ 0.52
CMTM3-214ENST00000567572 RPL9P32969 192 aaKnown RBP18.27■□□□□ 0.52
CMTM3-214ENST00000567572 PPP6R3Q5H9R7 873 aaPredicted RBP18.27■□□□□ 0.52
CMTM3-214ENST00000567572 STEAP4Q687X5 459 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 HEATR6Q6AI08 1181 aaKnown RBP18.27■□□□□ 0.52
CMTM3-214ENST00000567572 UNC5AQ6ZN44 842 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 PRPF39Q86UA1 669 aaKnown RBP18.27■□□□□ 0.52
CMTM3-214ENST00000567572 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.27■□□□□ 0.52
CMTM3-214ENST00000567572 ENDOVQ8N8Q3 282 aaKnown RBP18.27■□□□□ 0.52
CMTM3-214ENST00000567572 C3orf58Q8NDZ4 430 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 SIGLEC10Q96LC7 697 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 OLFM3Q96PB7 478 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 CSPG4P5Q96PW8 444 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 HNRNPABQ99729 332 aaKnown RBP18.27■□□□□ 0.52
CMTM3-214ENST00000567572 ADAM2Q99965 735 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 KCNK4Q9NYG8 393 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 PCDHA11Q9Y5I1 949 aa18.27■□□□□ 0.52
CMTM3-214ENST00000567572 CEP350Q5VT06 3117 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 A8MUI8 341 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 NEFHP12036 1026 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 TRAF7Q6Q0C0 670 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 ZNF534Q76KX8 674 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 SLC43A3Q8NBI5 491 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 FAM13CQ8NE31 585 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 RFWD2Q8NHY2 731 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 CCDC110Q8TBZ0 833 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 ACMSDQ8TDX5 336 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 NSMCE1Q8WV22 266 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 TTC17Q96AE7 1141 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 SIKE1Q9BRV8 207 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 B3GNT5Q9BYG0 378 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 DHX35Q9H5Z1 703 aaKnown RBP18.27■□□□□ 0.51
CMTM3-214ENST00000567572 PLAC1Q9HBJ0 212 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 BATF3Q9NR55 127 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.27■□□□□ 0.51
CMTM3-214ENST00000567572 SIRPGQ9P1W8 387 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 L3MBTL1Q9Y468 752 aa18.27■□□□□ 0.51
CMTM3-214ENST00000567572 RFPL1O75677 317 aa18.26■□□□□ 0.51
CMTM3-214ENST00000567572 STK10O94804 968 aaKnown RBP18.26■□□□□ 0.51
CMTM3-214ENST00000567572 CALB2P22676 271 aa18.26■□□□□ 0.51
CMTM3-214ENST00000567572 ARL4AP40617 200 aa18.26■□□□□ 0.51
CMTM3-214ENST00000567572 MTM1Q13496 603 aa18.26■□□□□ 0.51
CMTM3-214ENST00000567572 UPP1Q16831 310 aa18.26■□□□□ 0.51
CMTM3-214ENST00000567572 ZNF449Q6P9G9 518 aa18.26■□□□□ 0.51
CMTM3-214ENST00000567572 LONP2Q86WA8 852 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms