RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CCDC26Q8TAB7 109 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 P2RY13Q9BPV8 354 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 NUP85Q9BW27 656 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 TKTL2Q9H0I9 626 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 LTB4R2Q9NPC1 389 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 ARHGEF38Q9NXL2 777 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 CTTNBP2NLQ9P2B4 639 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 UVRAGQ9P2Y5 699 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 INTUQ9ULD6 942 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 TMEM191CA6NGB0 347 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 OTOL1A6NHN0 477 aaPredicted RBP12.61□□□□□ -0.39
SF3B3-208ENST00000567250 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 EIF3CLB5ME19 914 aaKnown RBP12.61□□□□□ -0.39
SF3B3-208ENST00000567250 CACNG3O60359 315 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 LCA5LO95447 670 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 CYP1A2P05177 515 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 TYRP14679 529 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 MAGEA9P43362 315 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 SOX9P48436 509 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 VCPP55072 806 aaKnown RBP12.61□□□□□ -0.39
SF3B3-208ENST00000567250 GRSF1Q12849 480 aaKnown RBP eCLIP12.61□□□□□ -0.39
SF3B3-208ENST00000567250 PIGHQ14442 188 aaPredicted RBP12.61□□□□□ -0.39
SF3B3-208ENST00000567250 UBXN2BQ14CS0 331 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 C15orf59Q2T9L4 293 aaPredicted RBP12.61□□□□□ -0.39
SF3B3-208ENST00000567250 MPP7Q5T2T1 576 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 FAM131BQ86XD5 332 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 TMEM25Q86YD3 366 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 RHOT2Q8IXI1 618 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 FLCNQ8NFG4 579 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 PJA1Q8NG27 643 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 ZNF564Q8TBZ8 553 aaPredicted RBP12.61□□□□□ -0.39
SF3B3-208ENST00000567250 DDI1Q8WTU0 396 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 CD101Q93033 1021 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 PBXIP1Q96AQ6 731 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 EIF3CQ99613 913 aaKnown RBP12.61□□□□□ -0.39
SF3B3-208ENST00000567250 OSBPL6Q9BZF3 934 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 IP6K2Q9UHH9 426 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 ANAPC7Q9UJX3 599 aa12.61□□□□□ -0.39
SF3B3-208ENST00000567250 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 MYO1FO00160 1098 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
SF3B3-208ENST00000567250 GPR37L1O60883 481 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 NDUFA10O95299 355 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 PENKP01210 267 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-208ENST00000567250 APODP05090 189 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 TFE3P19532 575 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-208ENST00000567250 TACR2P21452 398 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 DRD1P21728 446 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 FBXO43Q4G163 708 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 FAM133BQ5BKY9 247 aaKnown RBP12.6□□□□□ -0.39
SF3B3-208ENST00000567250 MS4A13Q5J8X5 152 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 DGKKQ5KSL6 1271 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 FYB2Q5VWT5 728 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 RAP1GAP2Q684P5 730 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 NADSYN1Q6IA69 706 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 GRAMD4Q6IC98 578 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 LRRC31Q6UY01 552 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 DNAAF5Q86Y56 855 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 FBXL6Q8N531 539 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 RFFLQ8WZ73 363 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 CENPIQ92674 756 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-208ENST00000567250 NTAN1Q96AB6 310 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 TMA16Q96EY4 203 aaKnown RBP12.6□□□□□ -0.39
SF3B3-208ENST00000567250 HAPLN3Q96S86 360 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 PNKPQ96T60 521 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 IER2Q9BTL4 223 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 SLC2A11Q9BYW1 496 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
SF3B3-208ENST00000567250 CALCOCO1Q9P1Z2 691 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 DEC1Q9P2X7 70 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 NDRG2Q9UN36 371 aaKnown RBP12.6□□□□□ -0.39
SF3B3-208ENST00000567250 DOCK4Q8N1I0 1966 aa12.6□□□□□ -0.39
SF3B3-208ENST00000567250 TULP3O75386 442 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 PAGE1O75459 146 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 AOC1P19801 751 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 TARSP26639 723 aaKnown RBP12.59□□□□□ -0.39
SF3B3-208ENST00000567250 SLC6A4P31645 630 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 OPRD1P41143 372 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 DGKGP49619 791 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 CLCN5P51795 746 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 HDAC4P56524 1084 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 KRT83P78385 493 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 SCAPQ12770 1279 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 CDH18Q13634 790 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 PON2Q15165 354 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 E2F5Q15329 346 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 TMEM196Q5HYL7 178 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 EFHC2Q5JST6 749 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 IER5LQ5T953 404 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 PIK3R6Q5UE93 754 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 CWF19L1Q69YN2 538 aaKnown RBP12.59□□□□□ -0.39
SF3B3-208ENST00000567250 ASTLQ6HA08 431 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-208ENST00000567250 TXNDC11Q6PKC3 985 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 SLFN11Q7Z7L1 901 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 ETFBKMTQ8IXQ9 262 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 LGI2Q8N0V4 545 aa12.59□□□□□ -0.39
SF3B3-208ENST00000567250 SYNPOQ8N3V7 929 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms