RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 ARL13BQ3SXY8 428 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 SLC45A4Q5BKX6 768 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 BEND5Q7L4P6 421 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 CCDC13Q8IYE1 715 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 SLC39A11Q8N1S5 342 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 BBOF1Q8ND07 529 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 EPS8L3Q8TE67 593 aaKnown RBP11.72□□□□□ -0.53
LINC00562-201ENST00000566385 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 FBXO32Q969P5 355 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 WDR83Q9BRX9 315 aaKnown RBP11.72□□□□□ -0.53
LINC00562-201ENST00000566385 FBXO44Q9H4M3 255 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 PRDM12Q9H4Q4 367 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 GOLGA6AQ9NYA3 693 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 CXXC1Q9P0U4 656 aaPredicted RBP11.72□□□□□ -0.53
LINC00562-201ENST00000566385 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00562-201ENST00000566385 NEU3Q9UQ49 428 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 SHROOM3Q8TF72 1996 aa11.72□□□□□ -0.53
LINC00562-201ENST00000566385 TLDC2A0PJX2 215 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 AVILO75366 819 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 PAGE1O75459 146 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 SOD2P04179 222 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 ZFXP17010 805 aaPredicted RBP11.71□□□□□ -0.53
LINC00562-201ENST00000566385 AIF1P55008 147 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 IFFO1Q0D2I5 559 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 EFEMP1Q12805 493 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 KRT71Q3SY84 523 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 CAPN12Q6ZSI9 719 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 FAM43BQ6ZT52 329 aaPredicted RBP11.71□□□□□ -0.53
LINC00562-201ENST00000566385 MIB1Q86YT6 1006 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 PPIL6Q8IXY8 311 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 TMEM199Q8N511 208 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 TMEM169Q96HH4 297 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 CCSER2Q9H7U1 834 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 SAYSD1Q9NPB0 183 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 NDFIP2Q9NV92 336 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 ARHGEF38Q9NXL2 777 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.71□□□□□ -0.53
LINC00562-201ENST00000566385 ALPK3Q96L96 1907 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 KIAA1671Q9BY89 1806 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 ZBBXA8MT70 800 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 GOLGA8KD6RF30 607 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 PIAS1O75925 651 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 MYZAPP0CAP1 466 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 MAGEA4P43358 317 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 AP1B1Q10567 949 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 PAFAH1B3Q15102 231 aaKnown RBP11.71□□□□□ -0.53
LINC00562-201ENST00000566385 LONRF1Q17RB8 773 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 SPDYCQ5MJ68 293 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 ANKMY2Q8IV38 441 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 ZBED8Q8IZ13 594 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 CCNYQ8ND76 341 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 TFB1MQ8WVM0 346 aaKnown RBP11.71□□□□□ -0.53
LINC00562-201ENST00000566385 ZNF558Q96NG5 402 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 QKIQ96PU8 341 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00562-201ENST00000566385 YME1L1Q96TA2 773 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 ETNK1Q9HBU6 452 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 SHOC2Q9UQ13 582 aa11.71□□□□□ -0.53
LINC00562-201ENST00000566385 EYSQ5T1H1 3165 aa11.71□□□□□ -0.54
LINC00562-201ENST00000566385 FOXO6A8MYZ6 492 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 KCNK1O00180 336 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 CCR1P32246 355 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 PDIA2Q13087 525 aaKnown RBP11.7□□□□□ -0.54
LINC00562-201ENST00000566385 XRCC4Q13426 336 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 TERF2Q15554 542 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 HEATR6Q6AI08 1181 aaKnown RBP11.7□□□□□ -0.54
LINC00562-201ENST00000566385 RWDD4Q6NW29 188 aaKnown RBP11.7□□□□□ -0.54
LINC00562-201ENST00000566385 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
LINC00562-201ENST00000566385 C14orf80Q86SX3 495 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 AGGF1Q8N302 714 aaeCLIP11.7□□□□□ -0.54
LINC00562-201ENST00000566385 HTR3CQ8WXA8 447 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 BADQ92934 168 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 P2RY11Q96G91 374 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 CELF6Q96J87 481 aaKnown RBP11.7□□□□□ -0.54
LINC00562-201ENST00000566385 FCRL2Q96LA5 508 aaPredicted RBP11.7□□□□□ -0.54
LINC00562-201ENST00000566385 ATP6V1G3Q96LB4 118 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00562-201ENST00000566385 TRANK1O15050 2925 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 SLC38A8A6NNN8 435 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 KCNU1A8MYU2 1149 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 CSPG5O95196 566 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 HMBSP08397 361 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 LINC00271P0C7V0 271 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 DSG1Q02413 1049 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 KCNJ11Q14654 390 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 UBE2Q1Q7Z7E8 422 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 VPS52Q8N1B4 723 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 ZNF461Q8TAF7 563 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 SLC39A13Q96H72 371 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 SPATA17Q96L03 361 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 MPP6Q9NZW5 540 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 CTNNAL1Q9UBT7 734 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 BACE2Q9Y5Z0 518 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 HS3ST4Q9Y661 456 aa11.7□□□□□ -0.54
LINC00562-201ENST00000566385 ABLIM3O94929 683 aa11.69□□□□□ -0.54
LINC00562-201ENST00000566385 APRTP07741 180 aa11.69□□□□□ -0.54
LINC00562-201ENST00000566385 SPATA31D3P0C874 917 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms