RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 SNX19Q92543 992 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 DHTKD1Q96HY7 919 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-214ENST00000566230 NT5C1AQ9BXI3 368 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 DUSP16Q9BY84 665 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 SLC2A11Q9BYW1 496 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 CIPCQ9C0C6 399 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 LMBRD1Q9NUN5 540 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 ANKRD6Q9Y2G4 727 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-214ENST00000566230 MYLKQ15746 1914 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 PLXNA2O75051 1894 aa14.01□□□□□ -0.17
COMMD4-214ENST00000566230 A0A087WV48 116 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 IKBKBO14920 756 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 TNFSF14O43557 240 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 TIMM44O43615 452 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 ZIC2O95409 532 aaPredicted RBP14□□□□□ -0.17
COMMD4-214ENST00000566230 NR2F2P24468 414 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 PIK3CAP42336 1068 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 MCCD1P59942 119 aaPredicted RBP14□□□□□ -0.17
COMMD4-214ENST00000566230 SMAD1Q15797 465 aaKnown RBP14□□□□□ -0.17
COMMD4-214ENST00000566230 PPP1R26Q5T8A7 1209 aaPredicted RBP14□□□□□ -0.17
COMMD4-214ENST00000566230 LAYNQ6UX15 382 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 SERPINA13PQ6UXR4 307 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 SCUBE3Q8IX30 993 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 FAM217AQ8IXS0 508 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 ERCC4Q92889 916 aaPredicted RBP14□□□□□ -0.17
COMMD4-214ENST00000566230 TSG101Q99816 390 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 LHX5Q9H2C1 402 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 CYP3A43Q9HB55 503 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 TM9SF3Q9HD45 589 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 OSGEPQ9NPF4 335 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 KIAA1468Q9P260 1216 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 MAN1B1Q9UKM7 699 aa14□□□□□ -0.17
COMMD4-214ENST00000566230 ARID1BQ8NFD5 2236 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-214ENST00000566230 H0Y8X5 98 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 CETN3O15182 167 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 PCDHGA12O60330 932 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 TSPAN3O60637 253 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 CYBBP04839 570 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 CD58P19256 250 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 PSMC2P35998 433 aaKnown RBP13.99□□□□□ -0.17
COMMD4-214ENST00000566230 FKBP3Q00688 224 aaKnown RBP13.99□□□□□ -0.17
COMMD4-214ENST00000566230 MORC3Q14149 939 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 E2F5Q15329 346 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 ZCWPW2Q504Y3 356 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 CEP135Q66GS9 1140 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 FOXR2Q6PJQ5 311 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 SMYD4Q8IYR2 804 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-214ENST00000566230 ZNF366Q8N895 744 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
COMMD4-214ENST00000566230 DDI1Q8WTU0 396 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 BIRC7Q96CA5 298 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 CDK5RAP1Q96SZ6 601 aaKnown RBP13.99□□□□□ -0.17
COMMD4-214ENST00000566230 ORAI3Q9BRQ5 295 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 TMEM245Q9H330 911 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 MARCH2Q9P0N8 246 aa13.99□□□□□ -0.17
COMMD4-214ENST00000566230 SLC12A8A0AV02 714 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 PSMA7O14818 248 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 HOXD9P28356 352 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-214ENST00000566230 HLA-FP30511 346 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 GRK6P43250 576 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 GRIA4P48058 902 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 RPS14P62263 151 aaKnown RBP13.98□□□□□ -0.17
COMMD4-214ENST00000566230 LRRC63Q05C16 580 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 TEAD4Q15561 434 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 CAMK4Q16566 473 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 CCDC157Q569K6 752 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 ANKRD40Q6AI12 368 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 ISM2Q6H9L7 571 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 DHRS13Q6UX07 377 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 INTS8Q75QN2 995 aaKnown RBP13.98□□□□□ -0.17
COMMD4-214ENST00000566230 ZC3H3Q8IXZ2 948 aaKnown RBP13.98□□□□□ -0.17
COMMD4-214ENST00000566230 TAS1R2Q8TE23 839 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 CYB5D2Q8WUJ1 264 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 IGSF8Q969P0 613 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 PRSS16Q9NQE7 514 aa13.98□□□□□ -0.17
COMMD4-214ENST00000566230 COL5A1P20908 1838 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-214ENST00000566230 TENM4Q6N022 2769 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 PPP1R3GB7ZBB8 358 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 SEMA4FO95754 770 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 KRT13P13646 458 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 TRIM21P19474 475 aaKnown RBP13.97□□□□□ -0.17
COMMD4-214ENST00000566230 CD27P26842 260 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 CTSKP43235 329 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 CCT8P50990 548 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 VAMP7P51809 220 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 YWHAGP61981 247 aaKnown RBP eCLIP13.97□□□□□ -0.17
COMMD4-214ENST00000566230 PPP3CAQ08209 521 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 TRIP4Q15650 581 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-214ENST00000566230 FNDC3BQ53EP0 1204 aaKnown RBP13.97□□□□□ -0.17
COMMD4-214ENST00000566230 ZNF394Q53GI3 561 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 RAB41Q5JT25 222 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 BHLHA9Q7RTU4 235 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 KIAA0907Q7Z7F0 614 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-214ENST00000566230 ADIPOR2Q86V24 386 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 PIGZQ86VD9 579 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 NDRG1Q92597 394 aaKnown RBP13.97□□□□□ -0.17
COMMD4-214ENST00000566230 ARID3AQ99856 593 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 UBXN6Q9BZV1 441 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms