RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 PECAM1P16284 738 aaPredicted RBP31.61■■■□□ 2.65
CTCF-203ENST00000566078 OTUD4Q01804 1114 aaKnown RBP31.61■■■□□ 2.65
CTCF-203ENST00000566078 DPYSQ14117 519 aa31.61■■■□□ 2.65
CTCF-203ENST00000566078 GLE1Q53GS7 698 aaKnown RBP31.61■■■□□ 2.65
CTCF-203ENST00000566078 NUGGCQ68CJ6 796 aa31.61■■■□□ 2.65
CTCF-203ENST00000566078 NPNTQ6UXI9 565 aa31.61■■■□□ 2.65
CTCF-203ENST00000566078 CCDC26Q8TAB7 109 aa31.61■■■□□ 2.65
CTCF-203ENST00000566078 ACTL9Q8TC94 416 aa31.61■■■□□ 2.65
CTCF-203ENST00000566078 BTN2A3PQ96KV6 586 aa31.61■■■□□ 2.65
CTCF-203ENST00000566078 ANKZF1Q9H8Y5 726 aa31.61■■■□□ 2.65
CTCF-203ENST00000566078 DAPK3O43293 454 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 LRIG2O94898 1065 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 MBL2P11226 248 aaPredicted RBP31.6■■■□□ 2.65
CTCF-203ENST00000566078 TGM2P21980 687 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 KCNQ1P51787 676 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 PIK3R6Q5UE93 754 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 C1orf228Q6PIY5 440 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 RUNDC3BQ96NL0 473 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 DNMT3BQ9UBC3 853 aaKnown RBP31.6■■■□□ 2.65
CTCF-203ENST00000566078 NRG2O14511 850 aaPredicted RBP31.6■■■□□ 2.65
CTCF-203ENST00000566078 LIASO43766 372 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 FGF19O95750 216 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 ZFXP17010 805 aaPredicted RBP31.6■■■□□ 2.65
CTCF-203ENST00000566078 GJA1P17302 382 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 KCNJ1P48048 391 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 HCAR3P49019 387 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 EPHA5P54756 1037 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 COG7P83436 770 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 DR1Q01658 176 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 PDZD4Q76G19 769 aaPredicted RBP31.6■■■□□ 2.65
CTCF-203ENST00000566078 CCDC105Q8IYK2 499 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 PPP2R3CQ969Q6 453 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 PLD4Q96BZ4 506 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 SLC22A12Q96S37 553 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 CDCA3Q99618 268 aaPredicted RBP31.6■■■□□ 2.65
CTCF-203ENST00000566078 PRKD2Q9BZL6 878 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 ETNK2Q9NVF9 386 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 PCYOX1Q9UHG3 505 aa31.6■■■□□ 2.65
CTCF-203ENST00000566078 CCDC195A0A1B0GUA6 201 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 OLFM2O95897 454 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 CCR2P41597 374 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 SLC7A5Q01650 507 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 DHX34Q14147 1143 aaKnown RBP31.59■■■□□ 2.65
CTCF-203ENST00000566078 NCBP2-AS2Q69YL0 99 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 UNC45BQ8IWX7 931 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 GPR161Q8N6U8 529 aaKnown RBP31.59■■■□□ 2.65
CTCF-203ENST00000566078 ARL14EPQ8N8R7 260 aaPredicted RBP31.59■■■□□ 2.65
CTCF-203ENST00000566078 P3H4Q92791 437 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 CYP2S1Q96SQ9 504 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 KLF16Q9BXK1 252 aaPredicted RBP31.59■■■□□ 2.65
CTCF-203ENST00000566078 FRMD8P1Q9BZ68 369 aaPredicted RBP31.59■■■□□ 2.65
CTCF-203ENST00000566078 DNPEPQ9ULA0 475 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 MFHAS1Q9Y4C4 1052 aa31.59■■■□□ 2.65
CTCF-203ENST00000566078 TTI1O43156 1089 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 RHOP08100 348 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 POU2F2P09086 479 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 SRGAP2BP0DMP2 458 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 IRF1P10914 325 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 MAATS1Q7Z4T9 603 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 MAB21L3Q8N8X9 362 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 VN1R2Q8NFZ6 395 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 ZNF707Q96C28 371 aaPredicted RBP31.58■■■□□ 2.65
CTCF-203ENST00000566078 PRDM16Q9HAZ2 1276 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 HEY1Q9Y5J3 304 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 NUP205Q92621 2012 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 SHROOM3Q8TF72 1996 aa31.58■■■□□ 2.65
CTCF-203ENST00000566078 HDCP19113 662 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 NRG1Q02297 640 aaPredicted RBP31.57■■■□□ 2.64
CTCF-203ENST00000566078 BYSLQ13895 437 aaKnown RBP31.57■■■□□ 2.64
CTCF-203ENST00000566078 MS4A13Q5J8X5 152 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 SHKBP1Q8TBC3 707 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 C1orf74Q96LT6 269 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 CCDC114Q96M63 670 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 IGFLR1Q9H665 355 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 GKN1Q9NS71 199 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 SMPD4Q9NXE4 827 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 ERCC2P18074 760 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 EPHB2P29323 1055 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 VCPP55072 806 aaKnown RBP31.57■■■□□ 2.64
CTCF-203ENST00000566078 NOMO1Q15155 1222 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 STXBP5Q5T5C0 1151 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 MANEALQ5VSG8 457 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 RWDD4Q6NW29 188 aaKnown RBP31.57■■■□□ 2.64
CTCF-203ENST00000566078 DRICH1Q6PGQ1 229 aaPredicted RBP31.57■■■□□ 2.64
CTCF-203ENST00000566078 LEMD2Q8NC56 503 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 TBC1D31Q96DN5 1066 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 TCEAL4Q96EI5 215 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 ZNF576Q9H609 170 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 STIM2Q9P246 746 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 DMGDHQ9UI17 866 aaKnown RBP31.57■■■□□ 2.64
CTCF-203ENST00000566078 NEU3Q9UQ49 428 aa31.57■■■□□ 2.64
CTCF-203ENST00000566078 NUP210Q8TEM1 1887 aaPredicted RBP31.56■■■□□ 2.64
CTCF-203ENST00000566078 TARSL2A2RTX5 802 aaKnown RBP31.56■■■□□ 2.64
CTCF-203ENST00000566078 E9PAM4 449 aa31.56■■■□□ 2.64
CTCF-203ENST00000566078 MCF2LO15068 1137 aa31.56■■■□□ 2.64
CTCF-203ENST00000566078 DCLK1O15075 740 aa31.56■■■□□ 2.64
CTCF-203ENST00000566078 STC2O76061 302 aa31.56■■■□□ 2.64
CTCF-203ENST00000566078 HEXIM1O94992 359 aaKnown RBP31.56■■■□□ 2.64
CTCF-203ENST00000566078 CKMP06732 381 aa31.56■■■□□ 2.64
CTCF-203ENST00000566078 HTR7P34969 479 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms