RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SEPT4O43236 478 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ALOX5P09917 674 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NPIPA8P0DM63 369 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 DLATP10515 647 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 ATP6V1B1P15313 513 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 BGNP21810 368 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 IFNA8P32881 189 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CLCNKBP51801 687 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TFAP4Q01664 338 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SLC18A2Q05940 514 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GRIK5Q16478 980 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 FXNQ16595 210 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CIAPIN1Q6FI81 312 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TMC5Q6UXY8 1006 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 EPM2AIP1Q7L775 607 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 EXD1Q8NHP7 514 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SPATA18Q8TC71 538 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CCDC90BQ9GZT6 254 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 C10orf88Q9H8K7 445 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 RPRD1BQ9NQG5 326 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 DDX56Q9NY93 547 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 TMEM9Q9P0T7 183 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ARMCX1Q9P291 453 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ACAD8Q9UKU7 415 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SYNGAP1Q96PV0 1343 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GOLGA8RI6L899 631 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 KPNA4O00629 521 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 AP3D1O14617 1153 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 UFL1O94874 794 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 IL1R1P14778 569 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NELFEP18615 380 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 PDHA2P29803 388 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 BST1Q10588 318 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 OGFOD2Q6N063 350 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SV2BQ7L1I2 683 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SLC43A3Q8NBI5 491 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TTC13Q8NBP0 860 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TP53INP1Q96A56 240 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NAA50Q9GZZ1 169 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 PAIP1Q9H074 479 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 IPO11Q9UI26 975 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 ABT1Q9ULW3 272 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 TCAF1Q9Y4C2 921 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ARHGEF28Q8N1W1 1705 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 TSPOAP1O95153 1857 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 C2orf74A8MZ97 194 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PSMD12O00232 456 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 EML1O00423 815 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 DYNC1LI2O43237 492 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 PRKCAP17252 672 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 YWHAHQ04917 246 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 PDAP1Q13442 181 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 STK32CQ86UX6 486 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZBTB46Q86UZ6 589 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 KBTBD6Q86V97 674 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZCCHC9Q8N567 271 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 DCPSQ96C86 337 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZNF778Q96MU6 729 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 WWP1Q9H0M0 922 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NAPBQ9H115 298 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TRIT1Q9H3H1 467 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 EHD1Q9H4M9 534 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GTF3C4Q9UKN8 822 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PSMD13Q9UNM6 376 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZNF451Q9Y4E5 1061 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 E5RJQ4 531 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TSPAN3O60637 253 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TCEA1P23193 301 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 DCKP27707 260 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 HOXD13P35453 343 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CASP3P42574 277 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 BMXP51813 675 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CBLBQ13191 982 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TAF5Q15542 800 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 OLFML2AQ68BL7 652 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 DYMQ7RTS9 669 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 DGKHQ86XP1 1220 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CADM3Q8N126 398 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NATD1Q8N6N6 113 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GRIN3AQ8TCU5 1115 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SLC26A7Q8TE54 656 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CCDC74AQ96AQ1 378 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 C12orf43Q96C57 262 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 ISOC1Q96CN7 298 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TXNDC15Q96J42 360 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CDHR1Q96JP9 859 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CCDC74BQ96LY2 380 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 RBM15Q96T37 977 aaKnown RBP eCLIP2.99□□□□□ -1.933e-6■■■□□ 18.1
CHD9-218ENST00000566029 DHRS9Q9BPW9 319 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ACSS3Q9H6R3 686 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 VPS28Q9UK41 221 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PTBP2Q9UKA9 531 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 ARHGEF35A5YM69 484 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SSX5O60225 188 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 FAM189A1O60320 539 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PROSCO94903 275 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ALX3O95076 343 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 MYCP01106 439 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 UGT2B4P06133 528 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PTPN1P18031 435 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms