RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 MMEP08473 750 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 CCDC172P0C7W6 258 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 HOXC13P31276 330 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 CCR1P32246 355 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 ARID5AQ03989 594 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 BYSLQ13895 437 aaKnown RBP20.61■□□□□ 0.89
CMTM3-211ENST00000565922 TAF5Q15542 800 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 LPAL2Q16609 132 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 GEN1Q17RS7 908 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 SKOR2Q2VWA4 1001 aaPredicted RBP20.61■□□□□ 0.89
CMTM3-211ENST00000565922 MDGA1Q8NFP4 955 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 SPACA7Q96KW9 195 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 GABRG3Q99928 467 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 FUCA2Q9BTY2 467 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 ZDHHC4Q9NPG8 344 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 NOCTQ9UK39 431 aaKnown RBP20.61■□□□□ 0.89
CMTM3-211ENST00000565922 CEP192Q8TEP8 1941 aa20.61■□□□□ 0.89
CMTM3-211ENST00000565922 NUP205Q92621 2012 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 TCRBV21S2A2A0A5A6 115 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 EPHB6O15197 1021 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 TBL1XO60907 577 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 GRAP2O75791 330 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 MOCS2O96007 188 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-211ENST00000565922 ABCB4P21439 1286 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 SLC6A4P31645 630 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 NOMO3P69849 1222 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 STARD3Q14849 445 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 ELF2Q15723 593 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 ZC3H12AQ5D1E8 599 aaKnown RBP20.6■□□□□ 0.89
CMTM3-211ENST00000565922 FAM102AQ5T9C2 384 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-211ENST00000565922 AHI1Q8N157 1196 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 FAM160A2Q8N612 972 aaPredicted RBP20.6■□□□□ 0.89
CMTM3-211ENST00000565922 RNF34Q969K3 372 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 P2RY11Q96G91 374 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 ZC3H10Q96K80 434 aaKnown RBP20.6■□□□□ 0.89
CMTM3-211ENST00000565922 ELOVL2Q9NXB9 296 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 PAXBP1Q9Y5B6 917 aa20.6■□□□□ 0.89
CMTM3-211ENST00000565922 EP300Q09472 2414 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-211ENST00000565922 RHOBTB1O94844 696 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 MATKP42679 507 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 EIF4EBP2Q13542 120 aaPredicted RBP20.59■□□□□ 0.89
CMTM3-211ENST00000565922 MS4A13Q5J8X5 152 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 RNF43Q68DV7 783 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 NADSYN1Q6IA69 706 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 RFWD3Q6PCD5 774 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 CHSY1Q86X52 802 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 MFN1Q8IWA4 741 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 PGBD3Q8N328 593 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.59■□□□□ 0.89
CMTM3-211ENST00000565922 HMGB4Q8WW32 186 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 TPSD1Q9BZJ3 242 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 CIPCQ9C0C6 399 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 RTN4Q9NQC3 1192 aaKnown RBP20.59■□□□□ 0.89
CMTM3-211ENST00000565922 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.59■□□□□ 0.89
CMTM3-211ENST00000565922 HCN2Q9UL51 889 aa20.59■□□□□ 0.89
CMTM3-211ENST00000565922 GOLGA6L7A0A1B0GV03 622 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 KCNU1A8MYU2 1149 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 F5H5T6 163 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 FOXD2O60548 495 aaPredicted RBP20.58■□□□□ 0.89
CMTM3-211ENST00000565922 HLA-FP30511 346 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 WASP42768 502 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 NAA35Q5VZE5 725 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 SND1Q7KZF4 910 aaKnown RBP eCLIP20.58■□□□□ 0.89
CMTM3-211ENST00000565922 XYLT1Q86Y38 959 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 DCLK2Q8N568 766 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 SLC20A1Q8WUM9 679 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 NUCKS1Q9H1E3 243 aaKnown RBP20.58■□□□□ 0.89
CMTM3-211ENST00000565922 CACNA2D2Q9NY47 1150 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 THAP10Q9P2Z0 257 aaPredicted RBP20.58■□□□□ 0.89
CMTM3-211ENST00000565922 GGA2Q9UJY4 613 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 CLEC4EQ9ULY5 219 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 MYO6Q9UM54 1294 aa20.58■□□□□ 0.89
CMTM3-211ENST00000565922 GVINP1Q7Z2Y8 2422 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 MUC22E2RYF6 1773 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-211ENST00000565922 SYNJ2BP-COX16A0A087WUM0 186 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 M0QYT0 321 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 F9P00740 461 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 CYP1A1P04798 512 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-211ENST00000565922 PABPC1P11940 636 aaKnown RBP20.57■□□□□ 0.88
CMTM3-211ENST00000565922 FERP16591 822 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 SGSHP51688 502 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 PITX1P78337 314 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-211ENST00000565922 FMO1Q01740 532 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 CDH18Q13634 790 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 IQCB1Q15051 598 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 PLK5Q496M5 336 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 TTC39BQ5VTQ0 682 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-211ENST00000565922 CHST9Q7L1S5 443 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 ARCQ7LC44 396 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 KBTBD6Q86V97 674 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 OLIG1Q8TAK6 271 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 CPA5Q8WXQ8 436 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 PRICKLE1Q96MT3 831 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-211ENST00000565922 ACOX2Q99424 681 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 ABCB8Q9NUT2 735 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 COX16Q9P0S2 106 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 STIM2Q9P246 746 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 PCDHGA5Q9Y5G8 931 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 STON1Q9Y6Q2 735 aa20.57■□□□□ 0.88
CMTM3-211ENST00000565922 A0A1W2PQC6 194 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms