RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ELSPBP1Q96BH3 223 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 OTUB2Q96DC9 234 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 HES6Q96HZ4 224 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 RBM41Q96IZ5 413 aaKnown RBP8.06□□□□□ -1.12
CDH1-208ENST00000565810 RPGRIP1Q96KN7 1286 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 C16orf45Q96MC5 204 aaPredicted RBP8.06□□□□□ -1.12
CDH1-208ENST00000565810 PEBP4Q96S96 227 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 NAPGQ99747 312 aaPredicted RBP8.06□□□□□ -1.12
CDH1-208ENST00000565810 SNRNP25Q9BV90 132 aaKnown RBP8.06□□□□□ -1.12
CDH1-208ENST00000565810 RAB6CQ9H0N0 254 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDH1-208ENST00000565810 THEGQ9P2T0 379 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 OR12D3Q9UGF7 316 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 DNAI1Q9UI46 699 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 AGO1Q9UL18 857 aaKnown RBP8.06□□□□□ -1.12
CDH1-208ENST00000565810 PACSIN2Q9UNF0 486 aaPredicted RBP8.06□□□□□ -1.12
CDH1-208ENST00000565810 CCL26Q9Y258 94 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 EYSQ5T1H1 3165 aa8.06□□□□□ -1.12
CDH1-208ENST00000565810 PLXNA3P51805 1871 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 LRRD1A4D1F6 860 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 C2CD4DB7Z1M9 353 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 H3BRJ5 948 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 EEF2KO00418 725 aaKnown RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 KCNK3O14649 394 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 ENC1O14682 589 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 SRGAP2O75044 1071 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 KLKB1P03952 638 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 TCF4P15884 667 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 PSMC3P17980 439 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 TACR2P21452 398 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 KDELR1P24390 212 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 TPI1P60174 286 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 COPS2P61201 443 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 ZXDBP98169 803 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 NRG1Q02297 640 aaPredicted RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 USP4Q13107 963 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 NR1H3Q13133 447 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 AUHQ13825 339 aaKnown RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 PDGFRLQ15198 375 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 ATP13A4Q4VNC1 1196 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 MS4A13Q5J8X5 152 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 RABGAP1LQ5R372 815 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 SEL1L2Q5TEA6 688 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 TXNRD3NBQ6F5E7 133 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 RWDD4Q6NW29 188 aaKnown RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 PARM1Q6UWI2 310 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 SYT10Q6XYQ8 523 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 Q6ZNB5 142 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 NYAP1Q6ZVC0 841 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 CCDC50Q8IVM0 306 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 BBS7Q8IWZ6 715 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 ZDHHC14Q8IZN3 488 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 CPXM2Q8N436 756 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 EXD1Q8NHP7 514 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 ADAMTS19Q8TE59 1207 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 OSCP1Q8WVF1 389 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 KRT35Q92764 455 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 TBC1D31Q96DN5 1066 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 TMA16Q96EY4 203 aaKnown RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 PBKQ96KB5 322 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 RPRD1AQ96P16 312 aaPredicted RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 TRMT61BQ9BVS5 477 aaKnown RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 CALN1Q9BXU9 219 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 CATSPERBQ9H7T0 1116 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 KLHL11Q9NVR0 708 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 GPATCH2LQ9NWQ4 482 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 DUS2Q9NX74 493 aaKnown RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 RCOR3Q9P2K3 495 aaPredicted RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 XPO7Q9UIA9 1087 aaKnown RBP8.05□□□□□ -1.12
CDH1-208ENST00000565810 STOML2Q9UJZ1 356 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 VANGL2Q9ULK5 521 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 HS3ST4Q9Y661 456 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 PTPRDP23468 1912 aa8.05□□□□□ -1.12
CDH1-208ENST00000565810 GOLGA6L7A0A1B0GV03 622 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 E9PAM4 449 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 SCAMP3O14828 347 aaKnown RBP8.04□□□□□ -1.12
CDH1-208ENST00000565810 CHADO15335 359 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 DDX3YO15523 660 aaKnown RBP8.04□□□□□ -1.12
CDH1-208ENST00000565810 GREM1O60565 184 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 TSPAN3O60637 253 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 NFATC1O95644 943 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 ATP1A1P05023 1023 aaKnown RBP8.04□□□□□ -1.12
CDH1-208ENST00000565810 IL9P15248 144 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 ZFXP17010 805 aaPredicted RBP8.04□□□□□ -1.12
CDH1-208ENST00000565810 TCP1P17987 556 aaKnown RBP8.04□□□□□ -1.12
CDH1-208ENST00000565810 FCARP24071 287 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 EPHB2P29323 1055 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 GDI1P31150 447 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 HCAR3P49019 387 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 PEX5P50542 639 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 TFF2Q03403 129 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 TFDP2Q14188 446 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 CA9Q16790 459 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 MPPE1Q53F39 396 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 DNTTIP2Q5QJE6 756 aaKnown RBP8.04□□□□□ -1.12
CDH1-208ENST00000565810 CCDC181Q5TID7 509 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 PIK3R6Q5UE93 754 aa8.04□□□□□ -1.12
CDH1-208ENST00000565810 TTC39BQ5VTQ0 682 aaPredicted RBP8.04□□□□□ -1.12
CDH1-208ENST00000565810 NADSYN1Q6IA69 706 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms