RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 WRNIP1Q96S55 665 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ZIC5Q96T25 663 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 MIPEPQ99797 713 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 MMTAG2Q9BU76 263 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 REXO4Q9GZR2 422 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 SERHL2Q9H4I8 314 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 KAT14Q9H8E8 782 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 FANCEQ9HB96 536 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NGBQ9NPG2 151 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CD93Q9NPY3 652 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 TUBA8Q9NY65 449 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 IL1RAPL1Q9NZN1 696 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 FBXW2Q9UKT8 454 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GPR55Q9Y2T6 319 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 PTRH2Q9Y3E5 179 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 GPR45Q9Y5Y3 372 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PSAT1Q9Y617 370 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PHIPQ8WWQ0 1821 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 LRRD1A4D1F6 860 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SH3D21A4FU49 640 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SPDYE3A6NKU9 549 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 H3BNC9 293 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PEX12O00623 359 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SH2B2O14492 632 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 AQP7O14520 342 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PHF2O75151 1096 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 TBX10O75333 385 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ACTL6BO94805 426 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GDF11O95390 407 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 METTL18O95568 372 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PTBP3O95758 552 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 MT-ATP6P00846 226 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 UBTFL6P0CB48 400 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 TSHRP16473 764 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GALP22466 123 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NR2F2P24468 414 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SLC16A2P36021 539 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PPP1R2P41236 205 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PHKA2P46019 1235 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 LSSP48449 732 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 HERVK_113P62684 666 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ERVK-24P63145 666 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SCN1BQ07699 218 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CLN3Q13286 438 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 LPIN1Q14693 890 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SNCBQ16143 134 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 P3H1Q32P28 736 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 HS1BP3Q53T59 392 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PPP1R26Q5T8A7 1209 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 PPP1R2P3Q6NXS1 205 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 FDX2Q6P4F2 183 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 PAPD4Q6PIY7 484 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 AFTPHQ6ULP2 937 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ARHGAP36Q6ZRI8 547 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 TMTC3Q6ZXV5 915 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SYT13Q7L8C5 426 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 VSIG10LQ86VR7 867 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SLC22A9Q8IVM8 553 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ITPRIPQ8IWB1 547 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NELFCDQ8IXH7 590 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 RBM12BQ8IXT5 1001 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 CARFQ8N187 725 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SLC43A2Q8N370 569 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 AADATQ8N5Z0 425 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 POMGNT2Q8NAT1 580 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 POGLUT1Q8NBL1 392 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GLB1L3Q8NCI6 653 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 SIMC1Q8NDZ2 872 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 OR52K1Q8NGK4 314 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 HUS1BQ8NHY5 278 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 BCAS4Q8TDM0 211 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 CCDC12Q8WUD4 166 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 PDCD6IPQ8WUM4 868 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 STARD8Q92502 1023 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 LPIN2Q92539 896 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ARHGAP45Q92619 1136 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 SYN2Q92777 582 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 RRNAD1Q96FB5 475 aaKnown RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 ART5Q96L15 291 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GAL3ST1Q99999 423 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 DPH2Q9BQC3 489 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 TEX12Q9BXU0 123 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 ISCUQ9H1K1 167 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 BRF2Q9HAW0 419 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GBA2Q9HCG7 927 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 MID1IP1Q9NPA3 183 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 GLRX2Q9NS18 164 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 POLR3BQ9NW08 1133 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 DPP7Q9UHL4 492 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 NUDCQ9Y266 331 aa3.19□□□□□ -1.9
CHD9-216ENST00000565803 POLR3KQ9Y2Y1 108 aaPredicted RBP3.19□□□□□ -1.9
CHD9-216ENST00000565803 FAM234BA2RU67 622 aa3.18□□□□□ -1.9
CHD9-216ENST00000565803 LRRIQ3A6PVS8 624 aaPredicted RBP3.18□□□□□ -1.9
CHD9-216ENST00000565803 RSPH10B2B2RC85 870 aa3.18□□□□□ -1.9
CHD9-216ENST00000565803 NPC1O15118 1278 aa3.18□□□□□ -1.9
CHD9-216ENST00000565803 TTI1O43156 1089 aa3.18□□□□□ -1.9
CHD9-216ENST00000565803 AKAP8O43823 692 aaKnown RBP3.18□□□□□ -1.9
CHD9-216ENST00000565803 PSMD10O75832 226 aa3.18□□□□□ -1.9
CHD9-216ENST00000565803 KLHL18O94889 574 aa3.18□□□□□ -1.9
CHD9-216ENST00000565803 KLHL2O95198 593 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms