RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 PPP3CCP48454 512 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 TAF10Q12962 218 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 VEPH1Q14D04 833 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 TRIP4Q15650 581 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-210ENST00000564587 RNASEH2BQ5TBB1 312 aaKnown RBP16.07■□□□□ 0.16
COMMD4-210ENST00000564587 SDHAF4Q5VUM1 108 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 HEATR6Q6AI08 1181 aaKnown RBP16.07■□□□□ 0.16
COMMD4-210ENST00000564587 OTOP2Q7RTS6 562 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 LZTR1Q8N653 840 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 CASP10Q92851 521 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 OLFM3Q96PB7 478 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 ADAM7Q9H2U9 754 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 CATSPERBQ9H7T0 1116 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 USP29Q9HBJ7 922 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
COMMD4-210ENST00000564587 DTLQ9NZJ0 730 aa16.07■□□□□ 0.16
COMMD4-210ENST00000564587 MKI67P46013 3256 aaKnown RBP16.06■□□□□ 0.16
COMMD4-210ENST00000564587 ZNF638Q14966 1978 aaKnown RBP16.06■□□□□ 0.16
COMMD4-210ENST00000564587 GREB1Q4ZG55 1949 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 C5orf60A6NFR6 353 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 KCNU1A8MYU2 1149 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 AGPSO00116 658 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 TP73O15350 636 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 ERCC2P18074 760 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 TBX4P57082 545 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 USP46P62068 366 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 FAM193AP78312 1265 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 COG7P83436 770 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 GBE1Q04446 702 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 ZNF33AQ06730 810 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 PLD1Q13393 1074 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 UAP1Q16222 522 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-210ENST00000564587 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 VPS52Q8N1B4 723 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 TTC9BQ8N6N2 239 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 ATP6V0D2Q8N8Y2 350 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 SLC39A13Q96H72 371 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 TTC25Q96NG3 672 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 KLC2Q9H0B6 622 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 RXFP1Q9HBX9 757 aa16.06■□□□□ 0.16
COMMD4-210ENST00000564587 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
COMMD4-210ENST00000564587 C2CD2LO14523 706 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 CHADO15335 359 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 ADAM12O43184 909 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 PAGE1O75459 146 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 SYF2O95926 243 aaKnown RBP16.05■□□□□ 0.16
COMMD4-210ENST00000564587 ZSCAN5DPP0CG00 497 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 ETS1P14921 441 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 EN2P19622 333 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-210ENST00000564587 RBL1P28749 1068 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 HOXC13P31276 330 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 GDF10P55107 478 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 RING1Q06587 406 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 IFFO1Q0D2I5 559 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 CBLBQ13191 982 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 KLHDC10Q6PID8 442 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 CENPUQ71F23 418 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 C16orf59Q7L2K0 433 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 CCDC25Q86WR0 208 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 GLIS1Q8NBF1 620 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 STKLD1Q8NE28 680 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 HTR3CQ8WXA8 447 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 HERVK_113Q902F9 699 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 BADQ92934 168 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 CLP1Q92989 425 aaKnown RBP16.05■□□□□ 0.16
COMMD4-210ENST00000564587 TBC1D31Q96DN5 1066 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 TRMT2BQ96GJ1 504 aaKnown RBP16.05■□□□□ 0.16
COMMD4-210ENST00000564587 MYRFLQ96LU7 910 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 RAD9AQ99638 391 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 CRISPLD1Q9H336 500 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 MARCH2Q9P0N8 246 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 UXTQ9UBK9 157 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-210ENST00000564587 SFMBT1Q9UHJ3 866 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 RWDD3Q9Y3V2 267 aa16.05■□□□□ 0.16
COMMD4-210ENST00000564587 HBS1LQ9Y450 684 aaKnown RBP16.05■□□□□ 0.16
COMMD4-210ENST00000564587 CENPFP49454 3210 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 H0YGN5 161 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 RIPK2O43353 540 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 FGF18O76093 207 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 LRIG2O94898 1065 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 MYZAPP0CAP1 466 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 CTSAP10619 480 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 ATF6P18850 670 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 EPHB2P29323 1055 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 FDFT1P37268 417 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 MLLT6P55198 1093 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-210ENST00000564587 ARL4CP56559 192 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 SLC10A2Q12908 348 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-210ENST00000564587 PRKD1Q15139 912 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-210ENST00000564587 TAF12Q16514 161 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 C10orf120Q5SQS8 335 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 TMEM240Q5SV17 173 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 CEP85LQ5SZL2 805 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 LRRC49Q8IUZ0 686 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 TCEAL8Q8IYN2 117 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 NAT8LQ8N9F0 302 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 GIPC2Q8TF65 315 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 PRCCQ92733 491 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-210ENST00000564587 RBM15Q96T37 977 aaKnown RBP eCLIP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms