RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 IP6K2Q9UHH9 426 aa12.93□□□□□ -0.34
KARS-204ENST00000564578 BTNL10A8MVZ5 291 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 PROSCO94903 275 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 IL1R2P27930 398 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 MIPP30301 263 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 CHKAP35790 457 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 GGCXP38435 758 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 MLLT6P55198 1093 aaPredicted RBP12.92□□□□□ -0.34
KARS-204ENST00000564578 SCYL2Q6P3W7 929 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
KARS-204ENST00000564578 SPHK2Q9NRA0 654 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 HEBP1Q9NRV9 189 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 TMEM51Q9NW97 253 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 HS3ST4Q9Y661 456 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 RNF8O76064 485 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 PCK1P35558 622 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 SGSHP51688 502 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 MESDQ14696 234 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 TXNRD3NBQ6F5E7 133 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 TPGS1Q6ZTW0 290 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 KIAA1328Q86T90 577 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 ZNF683Q8IZ20 524 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 ATP6V0D2Q8N8Y2 350 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 DNASE1L2Q92874 299 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 NTAN1Q96AB6 310 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 PRICKLE1Q96MT3 831 aaPredicted RBP12.92□□□□□ -0.34
KARS-204ENST00000564578 HAPLN3Q96S86 360 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 PAXBP1Q9Y5B6 917 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 SNX10Q9Y5X0 201 aa12.92□□□□□ -0.34
KARS-204ENST00000564578 COL4A2P08572 1712 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 BUB1O43683 1085 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 BUB1BO60566 1050 aaPredicted RBP12.91□□□□□ -0.34
KARS-204ENST00000564578 NFATC1O95644 943 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 ARHGAP25P42331 645 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 SOX9P48436 509 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 SCAPQ12770 1279 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 KIF5AQ12840 1032 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 AUHQ13825 339 aaKnown RBP12.91□□□□□ -0.34
KARS-204ENST00000564578 ITPRIPL2Q3MIP1 535 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 FYB2Q5VWT5 728 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 RAP1GAP2Q684P5 730 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 NAIF1Q69YI7 327 aaPredicted RBP12.91□□□□□ -0.34
KARS-204ENST00000564578 SLFN11Q7Z7L1 901 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 C14orf80Q86SX3 495 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 UBALD2Q8IYN6 164 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 BHMTQ93088 406 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 C1orf74Q96LT6 269 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 SIK2Q9H0K1 926 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 GOLPH3Q9H4A6 298 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 MARK1Q9P0L2 795 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 SLC12A6Q9UHW9 1150 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 FZD10Q9ULW2 581 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 USP18Q9UMW8 372 aa12.91□□□□□ -0.34
KARS-204ENST00000564578 FAM72CH0Y354 149 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 TSPAN3O60637 253 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 PENKP01210 267 aaPredicted RBP12.9□□□□□ -0.34
KARS-204ENST00000564578 CCDC175P0C221 793 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 GJA4P35212 333 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 NOP2P46087 812 aaKnown RBP12.9□□□□□ -0.34
KARS-204ENST00000564578 ZXDAP98168 799 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 PFKPQ01813 784 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 SLC25A11Q02978 314 aaKnown RBP12.9□□□□□ -0.34
KARS-204ENST00000564578 MESP2Q0VG99 397 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 SLC44A4Q53GD3 710 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 FAM72AQ5TYM5 149 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 FAM72DQ6L9T8 149 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 FBXL22Q6P050 247 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 TXNDC11Q6PKC3 985 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 FAM72BQ86X60 149 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 PYROXD2Q8N2H3 581 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 TPCN2Q8NHX9 752 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 PLK2Q9NYY3 685 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 WNT16Q9UBV4 365 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 TICRRQ7Z2Z1 1910 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 COL4A3Q01955 1670 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 TECTAO75443 2155 aa12.9□□□□□ -0.34
KARS-204ENST00000564578 KRBA1A5PL33 1030 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 HOXC11O43248 304 aaPredicted RBP12.9□□□□□ -0.35
KARS-204ENST00000564578 NRDCO43847 1150 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 TACR2P21452 398 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 MAN1A1P33908 653 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 IRAK1P51617 712 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 TAS2R40P59535 323 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.35
KARS-204ENST00000564578 MTA1Q13330 715 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 CA9Q16790 459 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 KCNT1Q5JUK3 1230 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 RNF43Q68DV7 783 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 ZNF662Q6ZS27 426 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 C12orf40Q86WS4 652 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 ETFBKMTQ8IXQ9 262 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 CPA6Q8N4T0 437 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 IGSF8Q969P0 613 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 TMA16Q96EY4 203 aaKnown RBP12.9□□□□□ -0.35
KARS-204ENST00000564578 SNRNP25Q9BV90 132 aaKnown RBP12.9□□□□□ -0.35
KARS-204ENST00000564578 BBS2Q9BXC9 721 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 OSBPL2Q9H1P3 480 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 OR12D3Q9UGF7 316 aa12.9□□□□□ -0.35
KARS-204ENST00000564578 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms