RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 CFIP05156 583 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 MAPK8P45983 427 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 SLC11A2P49281 568 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 TPMTP51580 245 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 STX17P56962 302 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 ZNF252P-AS1Q0IIN9 211 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 UAP1L1Q3KQV9 507 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 FAM133BQ5BKY9 247 aaKnown RBP17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 WDR45BQ5MNZ6 344 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 AHI1Q8N157 1196 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 SORCS1Q8WY21 1168 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 PRCCQ92733 491 aaPredicted RBP17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 GOLGA1Q92805 767 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 ERLEC1Q96DZ1 483 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 SIPA1Q96FS4 1042 aa17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 TOE1Q96GM8 510 aaKnown RBP17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 DNAAF2Q9NVR5 837 aaKnown RBP17.92■□□□□ 0.46
VPS9D1-203ENST00000563798 ACSL4O60488 711 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 SYPP08247 313 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 PABPC1P11940 636 aaKnown RBP17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 ACADSBP45954 432 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 TBX4P57082 545 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 PTPRNQ16849 979 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 SERPINA13PQ6UXR4 307 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 ENOSF1Q7L5Y1 443 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 OR2T3Q8NH03 318 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 CLEC4CQ8WTT0 213 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 SLC39A13Q96H72 371 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 LMLNQ96KR4 655 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 FAM81BQ96LP2 452 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 SERPINB11Q96P15 392 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 SLC4A5Q9BY07 1137 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 PCED1AQ9H1Q7 454 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 SLC32A1Q9H598 525 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 FBRSQ9HAH7 460 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 ABCB8Q9NUT2 735 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 RWDD2AQ9UIY3 292 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 GGA2Q9UJY4 613 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 PLA2G4CQ9UP65 541 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 TLR6Q9Y2C9 796 aa17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 ASCC3Q8N3C0 2202 aaKnown RBP17.91■□□□□ 0.46
VPS9D1-203ENST00000563798 MUC22E2RYF6 1773 aaPredicted RBP17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 PIK3R2O00459 728 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 GJB3O75712 270 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 CALCAP01258 141 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 EPHX1P07099 455 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 DLDP09622 509 aaKnown RBP17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 GNSP15586 552 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 SLC6A4P31645 630 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 SGSHP51688 502 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 ATXN3P54252 364 aaPredicted RBP17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 ARID5AQ03989 594 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 SLC14A1Q13336 389 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 CHST9Q7L1S5 443 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 TMEM110Q86TL2 294 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 SCUBE3Q8IX30 993 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 DEFB124Q8NES8 71 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 DQX1Q8TE96 717 aaKnown RBP17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 FCRL2Q96LA5 508 aaPredicted RBP17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 DDX50Q9BQ39 737 aaKnown RBP17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 TRIM62Q9BVG3 475 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 NUP58Q9BVL2 599 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 KIAA1468Q9P260 1216 aa17.9■□□□□ 0.46
VPS9D1-203ENST00000563798 CACNA1BQ00975 2339 aa17.89■□□□□ 0.46
VPS9D1-203ENST00000563798 MAP1BP46821 2468 aaKnown RBP17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 METTL12A8MUP2 240 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 MED7O43513 233 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 OPHN1O60890 802 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 ST3GAL2Q16842 350 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 MBLAC2Q68D91 279 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 NADSYN1Q6IA69 706 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 RGL4Q8IZJ4 473 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 HDDC3Q8N4P3 179 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 MINDY1Q8N5J2 469 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 FIBINQ8TAL6 211 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 ZNF606Q8WXB4 792 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 TTC17Q96AE7 1141 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 MED15Q96RN5 788 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 GPR174Q9BXC1 333 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 ZDHHC5Q9C0B5 715 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 MIS12Q9H081 205 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 UBE2TQ9NPD8 197 aaPredicted RBP17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 FSCN3Q9NQT6 498 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 CEP295Q9C0D2 2601 aa17.89■□□□□ 0.45
VPS9D1-203ENST00000563798 A0A1B0GTW7 788 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 GOLGA6L7A0A1B0GV03 622 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 TBL1XO60907 577 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 ATP5BP06576 529 aaKnown RBP17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 ACADMP11310 421 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 CD59P13987 128 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 UBE2HP62256 183 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 ZBTB16Q05516 673 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 EIF4EBP2Q13542 120 aaPredicted RBP17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 HNRNPDQ14103 355 aaKnown RBP17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 PLEKHG6Q3KR16 790 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 DENND1BQ6P3S1 775 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 RFWD3Q6PCD5 774 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 TRIM65Q6PJ69 517 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 KDM1BQ8NB78 822 aa17.88■□□□□ 0.45
VPS9D1-203ENST00000563798 HJURPQ8NCD3 748 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms