RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CNTNAP2Q9UHC6 1331 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 FAM234BA2RU67 622 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 VIPP01282 170 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 ENO1P06733 434 aaKnown RBP3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 HARSP12081 509 aaKnown RBP3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 IDEP14735 1019 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 ERV3-1Q14264 604 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 SMTNL2Q2TAL5 461 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 ANXA2RQ3ZCQ2 193 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 COBLL1Q53SF7 1204 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 NUGGCQ68CJ6 796 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 HIBCHQ6NVY1 386 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 B4GALNT4Q76KP1 1039 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 TXLNBQ8N3L3 684 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 KAT2BQ92831 832 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 EME1Q96AY2 570 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 GPR78Q96P69 363 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 TRIM2Q9C040 744 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 AAMDCQ9H7C9 122 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 THSD1Q9NS62 852 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 RGL1Q9NZL6 768 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 B3GNT3Q9Y2A9 372 aa3.82□□□□□ -1.8
HMGB1P33-201ENST00000563485 KIR2DS5A0A0G2JLQ3 304 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 KIR2DS3K7RE56 304 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 APAF1O14727 1248 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 PMM2O15305 246 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 DHHO43323 396 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 NCK2O43639 380 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 ATG13O75143 517 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 SRGAP2BP0DMP2 458 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 CDKN2AP42771 156 aaKnown RBP3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 PPATQ06203 517 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 NSUN2Q08J23 767 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 IFIT5Q13325 482 aaKnown RBP3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 GPR162Q16538 588 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 ARL13BQ3SXY8 428 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 GLE1Q53GS7 698 aaKnown RBP3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 LIPMQ5VYY2 423 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 TTLL5Q6EMB2 1281 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 ZNF474Q6S9Z5 364 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 KRT27Q7Z3Y8 459 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 TMEM199Q8N511 208 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 ZFPM2Q8WW38 1151 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 NUDT22Q9BRQ3 303 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 SARGQ9BW04 601 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 MRPL44Q9H9J2 332 aaKnown RBP3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 FSCN3Q9NQT6 498 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 STARD7Q9NQZ5 370 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 IPO11Q9UI26 975 aaKnown RBP3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 UTS2RQ9UKP6 389 aa3.81□□□□□ -1.8
HMGB1P33-201ENST00000563485 ZNF335Q9H4Z2 1342 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 A6NNC1 897 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 J3KTA2 159 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 GTPBP1O00178 669 aaKnown RBP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 PRPF4O43172 522 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 ZC3H11AO75152 810 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 KAT7O95251 611 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 WNT1P04628 370 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 MYL3P08590 195 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 RFPL3SP0C7P2 107 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 CHRNB1P11230 501 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 HOXB2P14652 356 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 P2RX3P56373 397 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 PTGR1Q14914 329 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 DLGAP5Q15398 846 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 SAFBQ15424 915 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 MAPKAPK3Q16644 382 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 SLC35G1Q2M3R5 365 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 UBAP2Q5T6F2 1119 aaKnown RBP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 MSANTD2Q6P1R3 559 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 SKAP1Q86WV1 359 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 B4GALNT2Q8NHY0 566 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 NPIPB3Q92617 1050 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 PMM1Q92871 262 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 THOC3Q96J01 351 aaKnown RBP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 NAA15Q9BXJ9 866 aaKnown RBP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 PRDM16Q9HAZ2 1276 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 METTL14Q9HCE5 456 aaKnown RBP3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 FBXO28Q9NVF7 368 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 ANAPC4Q9UJX5 808 aa3.8□□□□□ -1.8
HMGB1P33-201ENST00000563485 GXYLT2A0PJZ3 443 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 NPC1O15118 1278 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 PPP6R2O75170 966 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 TAF5LO75529 589 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 SGPL1O95470 568 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 ITGA5P08648 1049 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 TNFSF4P23510 183 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 POLD2P49005 469 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 CBFBQ13951 182 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 PIK3CD-AS1Q5SR53 167 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 C6orf10Q5SRN2 563 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 ASPHD1Q5U4P2 390 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 FBXO38Q6PIJ6 1188 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 RASGRP3Q8IV61 690 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 DDIASQ8IXT1 998 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 SLC22A17Q8WUG5 538 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 ABHD14AQ9BUJ0 271 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 HTATIP2Q9BUP3 242 aa3.79□□□□□ -1.8
HMGB1P33-201ENST00000563485 EIF2AQ9BY44 585 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms