RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ZFRQ96KR1 1074 aaKnown RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 CDCA3Q99618 268 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 IGFLR1Q9H665 355 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 GKN1Q9NS71 199 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 ETNK2Q9NVF9 386 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 SAE1Q9UBE0 346 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 MFHAS1Q9Y4C4 1052 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 PRRC2BQ5JSZ5 2229 aaKnown RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 APOC4-APOC2K7ER74 178 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 APOL1O14791 398 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 XYLBO75191 536 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 LRIG2O94898 1065 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 PAPLNO95428 1278 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 APOC2P02655 101 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 RHOP08100 348 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 RHOXF2BP0C7M4 288 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 MBL2P11226 248 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 PECAM1P16284 738 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 HDCP19113 662 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 CHRNA3P32297 505 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 COILP38432 576 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 TERF1P54274 439 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 MLLT6P55198 1093 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 TPI1P60174 286 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 NTHL1P78549 312 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 COG7P83436 770 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 OTUD4Q01804 1114 aaKnown RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 NRG1Q02297 640 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 HYAL1Q12794 435 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 SNX1Q13596 522 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 TFDP2Q14188 446 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 CCNG2Q16589 344 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 SLC5A9Q2M3M2 681 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 MS4A13Q5J8X5 152 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 PRSS36Q5K4E3 855 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 MANEALQ5VSG8 457 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 NCBP2-AS2Q69YL0 99 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 PDZD4Q76G19 769 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 GRASPQ7Z6J2 395 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 C14orf80Q86SX3 495 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 MAB21L3Q8N8X9 362 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 UBXN4Q92575 508 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 PLD4Q96BZ4 506 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 BTN2A3PQ96KV6 586 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 C1orf74Q96LT6 269 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 GCNAQ96QF7 691 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 RHOXF2Q9BQY4 288 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 NSUN3Q9H649 340 aaKnown RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 ARHGEF4Q9NR80 690 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 NEU3Q9UQ49 428 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 DOCK8Q8NF50 2099 aa10.51□□□□□ -0.73
SMG1-208ENST00000563448 MYO18AQ92614 2054 aaKnown RBP10.51□□□□□ -0.73
SMG1-208ENST00000563448 UQCRHLA0A096LP55 91 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 SPDYE4A6NLX3 237 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 DCLK1O15075 740 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 RAD51CO43502 376 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 STC2O76061 302 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 FGF19O95750 216 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 GLP2RO95838 553 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 UQCRHP07919 91 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 ERCC2P18074 760 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 TGM2P21980 687 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 PTGIRP43119 386 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 KCNJ1P48048 391 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 TUBB4BP68371 445 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 ZXDBP98169 803 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 MLLT1Q03111 559 aaPredicted RBP10.5□□□□□ -0.73
SMG1-208ENST00000563448 TEAD2Q15562 447 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 KCTD19Q17RG1 926 aaPredicted RBP10.5□□□□□ -0.73
SMG1-208ENST00000563448 TCEAL5Q5H9L2 206 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 NUGGCQ68CJ6 796 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 NADSYN1Q6IA69 706 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 C8orf74Q6P047 294 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 C1orf228Q6PIY5 440 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 ELMSAN1Q6PJG2 1045 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 CCDC137Q6PK04 289 aaKnown RBP10.5□□□□□ -0.73
SMG1-208ENST00000563448 UNC45BQ8IWX7 931 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 ZNF683Q8IZ20 524 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 ACTL9Q8TC94 416 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 ADAMTS19Q8TE59 1207 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 EPAS1Q99814 870 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 PRMT1Q99873 361 aaKnown RBP10.5□□□□□ -0.73
SMG1-208ENST00000563448 SLC46A2Q9BY10 475 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 SLITRK6Q9H5Y7 841 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 ANKZF1Q9H8Y5 726 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 AMACRQ9UHK6 382 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 SLC12A6Q9UHW9 1150 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 DNPEPQ9ULA0 475 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 COLQQ9Y215 455 aaPredicted RBP10.5□□□□□ -0.73
SMG1-208ENST00000563448 GOLGA6L7A0A1B0GV03 622 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 A0A1W2PPC1 479 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 LINC01565O15544 149 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 LIASO43766 372 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 KLKB1P03952 638 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 IRF1P10914 325 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 FNTAP49354 379 aa10.5□□□□□ -0.73
SMG1-208ENST00000563448 ZNF135P52742 658 aaPredicted RBP10.5□□□□□ -0.73
SMG1-208ENST00000563448 SLC10A2Q12908 348 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms