RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GRIP1Q9Y3R0 1128 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 NEDD4P46934 1319 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CEMIPQ8WUJ3 1361 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 FMO5P49326 533 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 MAGEB5Q9BZ81 275 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 SF3B1O75533 1304 aaKnown RBP eCLIP6.41□□□□□ -1.38
CLK3-212ENST00000563418 KCNK1O00180 336 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 HAT1O14929 419 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 PTTG1O95997 202 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 FCER1AP12319 257 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 GMFBP60983 142 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 CAMK1Q14012 370 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 SURF1Q15526 300 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ADHFE1Q8IWW8 467 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 DCLK2Q8N568 766 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 FCGR1BQ92637 280 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ARL8BQ9NVJ2 186 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 SMPD3Q9NY59 655 aaPredicted RBP6.41□□□□□ -1.38
CLK3-212ENST00000563418 ZNF609O15014 1411 aa6.41□□□□□ -1.38
CLK3-212ENST00000563418 ORC5O43913 435 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 HUS1O60921 280 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 DHFRP00374 187 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 PRKCBP05771 671 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 RORAP35398 523 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ATP6V1E1P36543 226 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 LRRC19Q9H756 370 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 NCKIPSDQ9NZQ3 722 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 TMCC3Q9ULS5 477 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ADAMTS12P58397 1594 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 PI4K2BG5E9Z4 385 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 DGKIO75912 1065 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 NOL4O94818 638 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 CDH1P12830 882 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ETV3P41162 512 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 LIG4P49917 911 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 LPCAT4Q643R3 524 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 PDXDC2PQ6P474 469 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 DDIASQ8IXT1 998 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 XXYLT1Q8NBI6 393 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 NXNL1Q96CM4 212 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 NOL11Q9H8H0 719 aaKnown RBP6.4□□□□□ -1.38
CLK3-212ENST00000563418 RSAD1Q9HA92 442 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ZSWIM5Q9P217 1185 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 POLIQ9UNA4 740 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 RUVBL2Q9Y230 463 aaKnown RBP6.4□□□□□ -1.38
CLK3-212ENST00000563418 LINC00854A0A1B0GVQ3 168 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 K7EPI3 171 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ARHGEF15O94989 841 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 SLC4A1P02730 911 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 M6PRP20645 277 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 EIF3EP60228 445 aaKnown RBP6.4□□□□□ -1.38
CLK3-212ENST00000563418 IL5RAQ01344 420 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 SCYL2Q6P3W7 929 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 HES6Q96HZ4 224 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 CATSPERZQ9NTU4 200 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 SALL3Q9BXA9 1300 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 PLD2O14939 933 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ANXA6P08133 673 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ITGA4P13612 1032 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 CRKP46108 304 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 FRG1Q14331 258 aaKnown RBP6.4□□□□□ -1.38
CLK3-212ENST00000563418 TAF5Q15542 800 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 NFE2Q16621 373 aaPredicted RBP6.4□□□□□ -1.38
CLK3-212ENST00000563418 ANGPTL8Q6UXH0 198 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 P2RY8Q86VZ1 359 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 OSBP2Q969R2 916 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ANAPC2Q9UJX6 822 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 CNOT11Q9UKZ1 510 aaKnown RBP6.4□□□□□ -1.38
CLK3-212ENST00000563418 NR2E3Q9Y5X4 410 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 UBDO15205 165 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 CSDE1O75534 798 aaKnown RBP6.4□□□□□ -1.38
CLK3-212ENST00000563418 NIPAL4Q0D2K0 466 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 TXNRD1Q16881 649 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 PHC2Q8IXK0 858 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ZNF486Q96H40 463 aaPredicted RBP6.4□□□□□ -1.38
CLK3-212ENST00000563418 WDR11Q9BZH6 1224 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 SLC22A4Q9H015 551 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 DNAJC28Q9NX36 388 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 WASF2Q9Y6W5 498 aa6.4□□□□□ -1.38
CLK3-212ENST00000563418 ATP7AQ04656 1500 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 NUAK1O60285 661 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 CRTAMO95727 393 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 C7P10643 843 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 CYP4F2P78329 520 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 CYP4F3Q08477 520 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 ASRGL1Q7L266 308 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 RNF25Q96BH1 459 aaPredicted RBP6.4□□□□□ -1.39
CLK3-212ENST00000563418 CYP4F12Q9HCS2 524 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 TRMT13Q9NUP7 481 aaKnown RBP6.4□□□□□ -1.39
CLK3-212ENST00000563418 POLR3BQ9NW08 1133 aaPredicted RBP6.4□□□□□ -1.39
CLK3-212ENST00000563418 IL20Q9NYY1 176 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 HESX1Q9UBX0 185 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 MYH13Q9UKX3 1938 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 PIPSLA2A3N6 862 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 F8W031 263 aaPredicted RBP6.4□□□□□ -1.39
CLK3-212ENST00000563418 MAGEB2O15479 319 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 MPOP05164 745 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 ITGA6P23229 1130 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 DSTNP60981 165 aa6.4□□□□□ -1.39
CLK3-212ENST00000563418 CSNK2BP67870 215 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms