RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TLR8Q9NR97 1041 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 HSPBP1Q9NZL4 362 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 NUDT5Q9UKK9 219 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 PCDHGA4Q9Y5G9 962 aa8.11□□□□□ -1.11
HERPUD1-206ENST00000563343 CYP26A1O43174 497 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 TIMM44O43615 452 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 SIGLEC6O43699 453 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 USP12O75317 370 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 STAU1O95793 577 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 TNNC2P02585 160 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 DNTTP04053 509 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 KRT18P05783 430 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 CR2P20023 1033 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 HLA-FP30511 346 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 ARRB1P49407 418 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 EMP3P54852 163 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 PDE4CQ08493 712 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 GOLGA8FQ08AF8 430 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 GOLGA8DPQ0D2H9 430 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 GNL2Q13823 731 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 WDR72Q3MJ13 1102 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 ARL13BQ3SXY8 428 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 ARSIQ5FYB1 569 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 C6orf132Q5T0Z8 1188 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 NCEH1Q6PIU2 408 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 KIAA0907Q7Z7F0 614 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 SCD5Q86SK9 330 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 ADIPOR2Q86V24 386 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 CBWD2Q8IUF1 395 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 WDR49Q8IV35 697 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 CCDC83Q8IWF9 413 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 CPXM2Q8N436 756 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 ZNF276Q8N554 614 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 OXR1Q8N573 874 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 CYB5D2Q8WUJ1 264 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 LARP4BQ92615 738 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 MARVELD3Q96A59 401 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 DNAJC19Q96DA6 116 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 AK8Q96MA6 479 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 ACCSQ96QU6 501 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 LLPHQ9BRT6 129 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 SLC2A11Q9BYW1 496 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 XYLT2Q9H1B5 865 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 FBXO44Q9H4M3 255 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 THSD1Q9NS62 852 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 KRT82Q9NSB4 513 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 WDR70Q9NW82 654 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 AGO1Q9UL18 857 aaKnown RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 EXOC7Q9UPT5 735 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 SCML2Q9UQR0 700 aa8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 HEMK1Q9Y5R4 338 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-206ENST00000563343 ATP8B3O60423 1300 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 LRRK1Q38SD2 2015 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 A0A1B0GVM2 712 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 A0A1W2PQH9 124 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CDRT15L2A8MXV6 281 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 TLR4O00206 839 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 OPA1O60313 960 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CSO75390 466 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 AP1G2O75843 785 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 MYF5P13349 255 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 RARGP13631 454 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CCDC130P13994 396 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 HOXD9P28356 352 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CORO1AP31146 461 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CHKAP35790 457 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CCR5P51681 352 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 ASIC1P78348 528 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CLN3Q13286 438 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 ZNF211Q13398 564 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 TTC31Q49AM3 519 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 SLC25A45Q8N413 288 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 ZNF516Q92618 1163 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 SKA1Q96BD8 255 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CALML4Q96GE6 196 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 SLC46A1Q96NT5 459 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 SDCBP2Q9H190 292 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 RSPH9Q9H1X1 276 aaPredicted RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 NEUROG2Q9H2A3 272 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 PABPC3Q9H361 631 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 MTG2Q9H4K7 406 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 SMYD3Q9H7B4 428 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 CAAP1Q9H8G2 361 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 MRPL44Q9H9J2 332 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 OLFML3Q9NRN5 406 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 AASDHPPTQ9NRN7 309 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 FBXL12Q9NXK8 326 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 TBC1D7Q9P0N9 293 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 SEL1LQ9UBV2 794 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 TJP2Q9UDY2 1190 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 ZNF510Q9Y2H8 683 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 ZFC3H1O60293 1989 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 ICE1Q9Y2F5 2266 aa8.09□□□□□ -1.11
HERPUD1-206ENST00000563343 NOTCH2Q04721 2471 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 LRBAP50851 2863 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 LY6G6EA0A0G2JKS1 128 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 FRMD3A2A2Y4 597 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms